Job Description P24182 Confidence 91.24% Date Thu Jan 5 11:41:00 GMT 2012 Rank 362 Aligned Residues 132 % Identity 23% Template c1kh2D_ PDB info PDB header:ligase Chain: D: PDB Molecule:argininosuccinate synthetase; PDBTitle: crystal structure of thermus thermophilus hb82 argininosuccinate synthetase in complex with atp Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.
Predicted Secondary structure												.												.																					.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.												.																					.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	V	I	A	N	R	G	E	I	.	A	L	R	I	L	R	A	C	K	E	L	.	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	.	.	.	.	.	.	.	.	A	D	E	T	V	C	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.												.																					.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.												.																					.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	V	L	A	Y	S	G	G	L	D	T	S	I	I	L	K	W	L	K	E	T	Y	R	A	E	V	I	A	F	T	A	D	I	G	Q	G	E	E	V	E	E	A	R	E	K	A	L	R	T	G	A	S	K	A	I	A	L	D	L	K	E	E	F	V	R	D	F	V	F	P	M	M	R	A	G	A	V	Y	E
Template Known Secondary structure									S	S																									S	S	S	S														T		S															T							T	T			B	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
					52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.	.	.																																		.	.	.																															.	.
Query SS confidence		.	.	.																																		.	.	.																															.	.
Query Sequence		.	.	.	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G	Y	G	F	.	.	.	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	.	.	D	K	V	S	A	I	A	A	M
Query Conservation		.	.	.																																		.	.	.																															.	.
Alig confidence		.	.	.																																		.	.	.																						.	.	.	.						.	.
Template Conservation																																																														.	.	.	.
Template Sequence		G	Y	Y	L	L	G	T	S	I	A	R	P	L	I	A	K	H	L	V	R	I	A	E	E	E	G	A	E	A	I	A	H	G	A	T	G	K	G	N	D	Q	V	R	F	E	L	T	A	Y	A	L	K	P	D	I	K	V	I	A	P	.	.	.	.	W	R	E	W	S	F	Q	G	R	K	E	M	I	A	Y	A
Template Known Secondary structure		T	T	B			T	T	T	T																	T		S								T	T	S	S														T	T							.	.	.	.								S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	H	G	I	P	V	P	P	Y	S	M	D	A	N	L
Template Known Secondary structure				T													S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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