Job Description P24182 Confidence 98.66% Date Thu Jan 5 11:41:00 GMT 2012 Rank 90 Aligned Residues 160 % Identity 20% Template c1eucB_ PDB info PDB header:ligase Chain: B: PDB Molecule:succinyl-coa synthetase, beta chain; PDBTitle: crystal structure of dephosphorylated pig heart, gtp-2 specific succinyl-coa synthetase Resolution 2.10 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																								.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	.	P	V	I	I	K	A	S	G	G	G	G	G	R	G	M	.	.	.	.	.	.	.	.	.	.	.	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M
Query Conservation																																								.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																		.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		Y	Q	S	K	K	L	M	S	D	N	G	V	K	V	Q	R	F	F	.	.	.	V	A	D	T	A	N	E	A	L	E	A	A	K	R	L	N	A	K	E	I	V	L	K	A	Q	I	L	A	G	G	R	G	K	G	V	F	S	S	G	L	K	G	G	V	H	L	T	K	D	P	E	V	V	G	Q	L	A	K	Q
Template Known Secondary structure										T	T	T								.	.	.			S	S												T		S	S								S	S	S			T	T				T	T	S		B		S					S											T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		185	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.																						.	230	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.																														.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.																														.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	A	E	A	K	.	.	.	.	.	.	.	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	.	.	G	N	A	I	Y	L	A	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	C	S	M	Q	R
Query Conservation								.	.	.	.	.	.	.																														.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																														.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	G	Y	N	L	A	T	K	Q	T	P	K	E	G	V	K	V	N	K	V	M	V	A	E	A	L	D	I	S	R	E	T	Y	L	A	I	L	M	D	R	S	C	N	G	P	V	L	V	G	S	P	Q	G	G	V	D	I	E	E	V	A	A	S	N	P	E	L	I	F	K	E	Q	I	D	I	I	E	G	I
Template Known Secondary structure		T	T	T	S					T	T	S		T	T																S											G	G	G	T								S	S		S	S										G	G	G							B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	Q	K	V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	Y	R	G	A	G	T	F	E	F	L	F	E	N	G	E	F	Y	F	I	E	M	N	T
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	S	Q	A	Q	R	M	A	E	N	L	G	F	L	G	P	L	Q	N	Q	A	A	D	Q	I	K	K	L	Y	N	L	F	.	.	.	.	.	.	.	.	.	.	.	.	L	K	I	D	A	T	Q	V	E	V	N	P
Template Known Secondary structure													T	T			T																		.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.													.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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