 |
Job Description | P52076 | Confidence | 48.28% | Date | Thu Jan 5 12:05:11 GMT 2012 |
Rank | 312 | Aligned Residues | 65 |
% Identity | 14% | Template | d2hr3a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.40 |
|
 |
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | P | L | T | L | K | P | K | E | F | A | L | L | E | L | L | M | R | N | A | G | R | V | L | S | R | K | L | I | E | E | K | L | Y | T | W | D | E | E | V | T | S | N | A | V | E | V | H | V | H | H | L | R | R | K | L | G | S | D | F | I | R | T | V | H | G | I | G | Y | T | L | G | E | K |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |
|   |
|
|
|
|   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
| . |   |   |
|   |   |
|
|
|   |   |
| . | . | . | . | . |   |
|   |   |   |
|
|
|   |   |
|   |   |
|
|   | . | . | . |   |
|
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
Template Sequence |   |
Q | A | D | P | V | Q | F | S | Q | L | V | V | L | G | A | I | D | R | L | G | G | . |
D | V | T | P | S | E | L | A | A | A | E | . |
. |
. |
. |
. |
R | X | R | S | S | N | L | A | A | L | L | R | E | L | E | R | . |
. |
. |
G | G | L | I | V | R | H | A | R | T | R | V | S | L | S | S | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | . |
| B |
|  |  |  |  |  |  |  | T | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T | S |  |  |  |  |
|
|
|  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |
|
|
|
|  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|