Return to main results Retrieve Phyre Job Id

Job DescriptionP52076
Confidence73.28%DateThu Jan 5 12:05:11 GMT 2012
Rank230Aligned Residues57
% Identity26%Templated1r1ta_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ArsR-like transcriptional regulators
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190.........200.........210... ......
Predicted Secondary structure 





















....


Query SS confidence 






























































. . . .





Query Sequence  KPKEFALLELLMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIG. . . . YTLGEK
Query Conservation 
  
   
  
        
   
   
          

   
 


 

    
 



 
....
 
   
Alig confidence 














...









.....















...








.
....





Template Conservation     

 

  
    ...  
 


  
..... 

  


 

  
  ...



   
 .

   
 
   
Template Sequence  DPNRLRLLSLLARSE. . . LCVGDLAQAI. . . . . GVSESAVSHQLRSLRN. . . LRLVSYRKQ. GRHVYYQLQDH
Template Known Secondary structure 
TT

...B
.....T

...TTS.TTSS
Template Predicted Secondary structure 



...

.....


...


.


Template SS confidence 








































































   45....50......... 60......... 70.........80..... ....90.... .....100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions