Return to main results Retrieve Phyre Job Id

Job DescriptionP52076
Confidence97.53%DateThu Jan 5 12:05:11 GMT 2012
Rank139Aligned Residues60
% Identity30%Templated1biaa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Biotin repressor-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150.........160.........170.........180.........190.........200.........210........
Predicted Secondary structure 
























Query SS confidence 




































































Query Sequence  LKPKEFALLELLMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
Query Conservation 

  
   
  
        
   
   
          

   
 


 

    
 



 

 
  
Alig confidence 











..














.....















..
















Template Conservation     
   

 

..      
  


  
..... 

  

 
 
  
  .. 
  
 
  
 



  
Template Sequence  DNTVPLKLIALL. . ANGEFHSGEQLGETL. . . . . GMSRAAINKHIQTLRD. . WGVDVFTVPGKGYSLPE
Template Known Secondary structure 

..TTSS
B
.....TS
..TT


TTT
S
Template Predicted Secondary structure 
..




.....


..











Template SS confidence 




































































   3......10.... .....20......... 30.........40..... ....50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions