Job Description P52076 Confidence 40.72% Date Thu Jan 5 12:05:11 GMT 2012 Rank 342 Aligned Residues 48 % Identity 17% Template c3t72o_ PDB info PDB header:transcription/dna Chain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex Resolution 4.33 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		149	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	L	K	P	K	E	F	A	L	L	E	L	.	L	M	R	N	A	G	R	V	L	S	R	K	L	I	E	E	K	L	Y	T	W	D	E	E	V	T	S	N	A	V	E	V	H	V	H	H	L	R	R	K	L
Query Conservation														.
Alig confidence														.																			.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	Y	T	L	E	E	V	G	K	Q	F	.	.	.	.	.	D	V	T	R	E	R	I	R	Q	I	E	A	K	A	L	R	K	L
Template Known Secondary structure			S								T	T	T	T	T	S	S	S	S		S												.	.	.	.	.	S	S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580						.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions