Job Description P52076 Confidence 97.72% Date Thu Jan 5 12:05:11 GMT 2012 Rank 134 Aligned Residues 51 % Identity 20% Template c3sztB_ PDB info PDB header:transcription Chain: B: PDB Molecule:quorum-sensing control repressor; PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	E	P	L	T	L	K	P	K	E	F	A	L	L	E	L	L	M	R	N	A	G	R	V	L	S	R	K	L	I	E	E	K	L	Y	T	W	D	E	E	V	T	S	N	A	V	E	V	H	V	H	H	L	R	R	K	L	G
Query Conservation
Alig confidence																									.	.	.	.										.	.	.	.	.
Template Conservation																									.	.	.	.										.	.	.	.	.
Template Sequence		V	P	E	S	N	V	R	L	T	A	R	E	T	E	M	L	K	W	T	A	V	G	K	.	.	.	.	T	Y	G	E	I	G	L	I	L	.	.	.	.	.	S	I	D	Q	R	T	V	K	F	H	I	V	N	A	M	R	K	L	N
Template Known Secondary structure			G	G	G	G																T	T		.	.	.	.										.	.	.	.	.	T																	T	T
Template Predicted Secondary structure																									.	.	.	.										.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions