Return to main results Retrieve Phyre Job Id

Job DescriptionP52076
Confidence55.24%DateThu Jan 5 12:05:11 GMT 2012
Rank289Aligned Residues46
% Identity11%Templatec3nqoB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150.........160.........170.........180.........190.........200
Predicted Secondary structure 














Query SS confidence 


















































Query Sequence  LKPKEFALLELLMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRK
Query Conservation 

  
   
  
        
   
   
          

   
 


 
Alig confidence 




























.....
















Template Conservation 

  
  

  
        
  


  
..... 
   


  
  

  
Template Sequence  LTSRQYXTILSILHLPEEETTLNNIARKX. . . . . GTSKQNINRLVANLEKN
Template Known Secondary structure  S
TS
GGG

.....TS
T
Template Predicted Secondary structure 








.....



Template SS confidence 


















































   38.40.........50.........60...... ...70.........80...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions