Job Description P52076 Confidence 35.81% Date Thu Jan 5 12:05:11 GMT 2012 Rank 374 Aligned Residues 56 % Identity 21% Template c3cuoB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli Resolution 2.00 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	K	E	F	A	L	L	E	L	L	M	R	N	A	G	R	V	L	S	R	K	L	I	E	E	K	L	Y	T	W	D	E	E	V	T	S	N	A	V	E	V	H	V	H	H	L	R	R	K	L	G	S	D	F	I	R	T	V	H	G	I	G	Y	T	L
Query Conservation
Alig confidence																		.	.											.	.	.	.	.																	.	.	.
Template Conservation																		.	.											.	.	.	.	.																	.	.	.
Template Sequence		H	P	K	R	L	L	I	L	C	M	L	S	G	S	P	G	.	.	T	S	A	G	E	L	T	R	I	T	.	.	.	.	.	G	L	S	A	S	A	T	S	Q	H	L	A	R	M	R	D	.	.	.	E	G	L	I	D	S	Q	R	D	A	Q	R	I	L
Template Known Secondary structure		S											T	T		S		.	.											.	.	.	.	.																	.	.	.		T	S							S	S
Template Predicted Secondary structure																		.	.											.	.	.	.	.																	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions