Job Description P52076 Confidence 99.86% Date Thu Jan 5 12:05:11 GMT 2012 Rank 39 Aligned Residues 125 % Identity 18% Template c3cu5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		M	R	I	L	L	I	E	D	D	M	L	I	G	D	G	I	K	T	G	L	S	K	M	G	F	.	.	.	S	V	D	W	F	T	Q	G	R	Q	G	K	E	A	L	Y	S	A	P	Y	D	A	V	I	L	D	L	T	L	P	G	M	D	G	R	D	I	L	R	E	W	R	E	K	G	Q	R	E	P	V	L	I
Query Conservation																											.	.	.
Alig confidence																											.	.	.
Template Conservation
Template Sequence		L	R	I	L	I	V	D	D	E	K	L	T	R	D	G	L	I	A	N	I	N	W	K	A	L	S	F	D	Q	I	D	Q	A	D	D	G	I	N	A	I	Q	I	A	L	K	H	P	P	N	V	L	L	T	D	V	R	M	P	R	M	D	G	I	E	L	V	D	N	I	L	K	L	Y	P	D	C	S	V	I	F
Template Known Secondary structure									S											T	S		T	T	T	S									S	S											S			S						S			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	R	D	A	L	A	E	R	V	E	G	L	R	L	G	A	D	D	Y	L	C	K	P	F	A	L	I	E	V	A	A	R	L	E	A	L	M	R	R	T	N	G	Q	A	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	S	G	Y	S	D	K	E	Y	L	K	A	A	I	K	F	R	A	I	R	Y	V	E	K	P	I	D	P	S	E	I	M	D	A	L	K	Q	S	I	Q	T	V	L	Q	H	Q	A	Q
Template Known Secondary structure					T	T											S	S							S	S			T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions