Job Description P52076 Confidence 36.36% Date Thu Jan 5 12:05:11 GMT 2012 Rank 368 Aligned Residues 80 % Identity 11% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.	.	.	.	.	.	.																																				.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.																																				.	.	.	.
Query Sequence		G	D	G	I	K	T	G	L	S	K	M	G	F	S	V	D	W	F	T	Q	G	.	.	.	.	.	.	.	R	Q	G	K	E	A	L	Y	S	A	P	Y	D	A	V	I	L	D	L	T	L	P	G	M	D	G	R	D	I	L	R	E	W	R	E	.	.	.	.	K	G	Q	R	E	P	V	L	I	L	T	A	R
Query Conservation																							.	.	.	.	.	.	.																																				.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation
Template Sequence		I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M
Template Known Secondary structure												T	T							S	S				T	T													T	T		S											S	S																		S								T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	A	E	R	V	E	G	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	Q	D	A	A	N	T	A	K	A
Template Known Secondary structure		T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions