Job Description P52076 Confidence 37.09% Date Thu Jan 5 12:05:11 GMT 2012 Rank 365 Aligned Residues 80 % Identity 11% Template c2hqbA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30							.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure							.	.	.																							.	.	.	.	.	.
Query SS confidence							.	.	.																							.	.	.	.	.	.
Query Sequence		L	L	I	E	D	.	.	.	D	M	L	I	G	D	G	I	K	T	G	L	S	K	M	G	F	S	V	D	W	F	.	.	.	.	.	.	T	Q	G	R	Q	G	K	E	A	L	Y	S	A	P	Y	D	A	V	I	L	D	L	T	L	P	G	M	D	G	R	D	I	L	R	E	W	R	E	K	G	Q	R	E	P
Query Conservation							.	.	.																							.	.	.	.	.	.
Alig confidence							.	.	.																							.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		L	L	V	E	D	T	G	W	N	R	K	A	Y	E	G	L	L	N	I	H	S	N	L	D	V	D	V	V	L	E	E	G	V	N	S	E	Q	K	A	H	R	R	I	K	E	L	V	D	G	G	V	N	L	I	F	.	.	.	.	G	H	G	H	A	F	A	E	Y	F	S	T	I	H	N	Q	Y	P	D	V	H
Template Known Secondary structure										T														S												S														T	T						.	.	.	.			S	T								T	T	T	T	S		T	T	S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	L	T	A	R	D	A	L	A	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	S	F	N	G	E	V	K	G	E	N	I
Template Known Secondary structure						S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions