Job Description P52076 Confidence 38.85% Date Thu Jan 5 12:05:11 GMT 2012 Rank 352 Aligned Residues 90 % Identity 17% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		2	.	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.
Predicted Secondary structure										.	.	.																								.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence										.	.	.																								.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		R	I	L	L	I	E	D	D	.	.	.	M	L	I	G	D	G	I	K	T	G	L	S	K	M	G	F	S	V	D	W	F	T	Q	.	.	.	.	.	.	.	G	R	Q	G	K	E	A	L	Y	S	A	P	Y	D	A	V	I	L	D	L	T	L	P	G	M	D	G	.	.	.	.	.	.	.	.	R	D	I	L
Query Conservation										.	.	.																								.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence										.	.	.																								.	.	.	.	.	.	.																				.	.							.	.	.	.	.	.	.	.
Template Conservation																																																														.	.
Template Sequence		K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	V	Y	G	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V	E	K	F	L	S	E	K	M	E	I	I	I	V	D	.	.	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E	M	K
Template Known Secondary structure											S	S															T							T	T																		T	T		S						.	.				S			T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	W	R	E	K	G	Q	R	E	P	V	L	I	L	T	A	R	D	A	L	A	E	R	V	E	G	L	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D	A	S	I	G	Q	K	A	Y	D	L	A	S	K	F
Template Known Secondary structure										S								G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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