Job Description P0AB80 Confidence 100.00% Date Thu Jan 5 11:14:50 GMT 2012 Rank 4 Aligned Residues 295 % Identity 28% Template d2a1ha1 SCOP info D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes Resolution 1.80

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		D	Y	I	W	F	N	G	E	M	V	R	W	E	D	A	K	V	H	V	M	S	H	A	L	H	Y	G	T	S	V	F	E	G	I	R	C	Y	D	S	H	K	G	P	V	.	V	F	R	H	R	E	H	M	Q	R	L	H	D	S	A	K	I	Y	R	F	P	V	S	Q	S	I	D	E	L	M	E	A	C	R	D
Query Conservation																																														.
Alig confidence																																														.																						.
Template Conservation																																																																				.
Template Sequence		D	K	G	W	G	Q	P	R	I	Q	P	F	Q	N	L	T	L	H	P	A	S	S	S	L	H	Y	S	L	Q	L	F	E	G	M	K	A	F	K	G	K	D	Q	Q	V	R	L	F	R	P	W	L	N	M	D	R	M	L	R	S	A	M	R	L	C	L	P	.	S	F	D	K	L	E	L	L	E	C	I	R	R
Template Known Secondary structure		T	T										S							T	T	B					S														T	T	S						S															T	T			.
Template Predicted Secondary structure																																																																				.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.
		86	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.
Query Sequence		V	I	R	K	N	.	.	.	.	.	.	.	N	L	T	S	A	Y	I	R	P	L	I	F	V	G	D	V	G	M	G	V	N	P	P	A	G	Y	S	T	D	V	I	I	A	A	F	P	W	G	A	Y	L	G	A	E	A	L	E	Q	G	I	D	A	M	V	S	S	W	N	R	A	A	P	N	T	I	P	T	A
Query Conservation							.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																									.	.																			.
Template Conservation																																						.	.																			.
Template Sequence		L	I	E	V	D	K	D	W	V	P	D	A	A	G	T	S	L	Y	V	R	P	V	L	I	G	N	E	P	S	L	G	V	S	Q	P	R	.	.	R	A	L	L	F	V	I	L	C	P	V	G	A	Y	F	P	G	G	.	S	V	T	P	V	S	L	L	A	D	P	A	F	I	R	A	W	V	G	G	V	G	N
Template Known Secondary structure						T	G	G	G	S			S	T	T														B			S		S			S	.	.														S	S	S	S	S	.	S										T	T			S			T	T	S	S	T	T
Template Predicted Secondary structure																																						.	.																			.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																															.																				.	.	.	.	.
Query SS confidence																															.																				.	.	.	.	.
Query Sequence		A	K	A	G	G	N	Y	L	S	S	L	L	V	G	S	E	A	R	R	H	G	Y	Q	E	G	I	A	L	D	.	V	N	G	Y	I	S	E	G	A	G	E	N	L	F	E	V	K	D	G	.	.	.	.	.	V	L	F	T	P	P	F	T	S	S	A	L	P	G	I	T	R	D	A	I	I	K	L	A	K	E
Query Conservation																															.																				.	.	.	.	.
Alig confidence																															.																				.	.	.	.	.
Template Conservation
Template Sequence		Y	K	L	G	G	N	Y	G	P	T	V	L	V	Q	Q	E	A	L	K	R	G	C	E	Q	V	L	W	L	Y	G	P	D	H	Q	L	T	E	V	G	T	M	N	I	F	V	Y	W	T	H	E	D	G	V	L	E	L	V	T	P	P	L	N	G	V	I	L	P	G	V	V	R	Q	S	L	L	D	M	A	Q	T
Template Known Secondary structure		S		B	G	G	G	T	T	T											T	T		S							T	T	T	T						T	T										T	T	S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		233	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure				.																	.	.	.	.	.	.																						.	.	.	.										.
Query SS confidence				.																	.	.	.	.	.	.																						.	.	.	.										.
Query Sequence		L	G	.	I	E	V	R	E	Q	V	L	S	R	E	S	L	Y	L	A	.	.	.	.	.	.	D	E	V	F	M	S	G	T	A	A	E	I	T	P	V	R	S	V	D	G	I	.	.	.	.	Q	V	G	E	G	R	C	G	P	.	V	T	K	R	I	Q	Q	A	F	F	G	L	F	T	G	E	T	E	D	K
Query Conservation				.																	.	.	.	.	.	.																						.	.	.	.										.
Alig confidence				.																	.	.	.	.	.	.																						.	.	.	.										.																				.
Template Conservation																																																																																	.
Template Sequence		W	G	E	F	R	V	V	E	R	T	I	T	M	K	Q	L	L	R	A	L	E	E	G	R	V	R	E	V	F	G	S	G	T	A	C	Q	V	C	P	V	H	R	I	L	Y	K	D	R	N	L	H	I	P	T	M	E	N	G	P	E	L	I	L	R	F	Q	K	E	L	K	E	I	Q	Y	G	I	R	A	H	.
Template Known Secondary structure			T	S	S								B										T	T										T	T	T											T	T						T	T	G	G	G	T	T															T	T	S	S			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	W	L	D	Q	V
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	W	M	F	P	V
Template Known Secondary structure		.	T	T
Template Predicted Secondary structure		.
Template SS confidence
			360	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions