Job Description P0AB80 Confidence 100.00% Date Thu Jan 5 11:14:50 GMT 2012 Rank 3 Aligned Residues 301 % Identity 33% Template c3dtfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:branched-chain amino acid aminotransferase; PDBTitle: structural analysis of mycobacterial branched chain aminotransferase-2 implications for inhibitor design Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		T	K	K	A	D	Y	I	W	F	N	G	E	M	V	R	W	E	D	A	K	V	H	V	M	S	H	A	L	H	Y	G	T	S	V	F	E	G	I	R	C	Y	D	S	H	K	G	P	V	.	V	F	R	H	R	E	H	M	Q	R	L	H	D	S	A	K	I	Y	R	F	P	V	S	Q	S	I	D	E	L	M	E
Query Conservation																																																		.
Alig confidence																																																		.																						.
Template Conservation																																																																								.
Template Sequence		D	Y	T	V	D	E	G	W	H	N	A	Q	V	I	P	Y	G	P	I	Q	L	D	P	S	A	I	V	L	H	Y	G	Q	E	I	F	E	G	L	K	A	Y	R	W	A	D	G	S	I	V	S	F	R	P	E	A	N	A	A	R	L	Q	S	S	A	R	R	L	A	I	P	.	E	L	P	E	E	V	F	I	E
Template Known Secondary structure					T	T	T										S							T	T		T																		T	T	S						S															T	T			.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.
		82	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		A	C	R	D	V	I	R	K	N	N	.	.	.	.	.	.	.	.	L	T	S	A	Y	I	R	P	L	I	F	V	G	D	V	G	M	G	V	N	P	P	A	G	Y	S	T	D	V	I	I	A	A	F	P	W	G	A	Y	L	G	A	E	A	L	E	Q	G	I	D	A	M	V	S	S	W	N	R	A	A	P	N
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																								.	.																				.	.
Template Conservation																																											.	.																				.	.
Template Sequence		S	L	R	Q	L	I	A	V	D	E	K	W	V	P	P	A	G	G	E	E	S	L	Y	L	R	P	F	V	I	A	T	E	P	G	L	G	V	R	P	S	N	.	.	E	Y	R	Y	L	L	I	A	S	P	A	G	A	Y	F	K	G	G	I	.	.	K	P	V	S	V	W	L	S	H	E	Y	V	R	A	S	P
Template Known Secondary structure											G	G	G	S			T	T	S	S																	S		S			S	.	.														S	S	T	T	S		.	.									S	S			S			T
Template Predicted Secondary structure																																											.	.																				.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																					.	.	.	.
Query SS confidence																																			.	.																					.	.	.	.
Query Sequence		T	I	P	T	A	A	K	A	G	G	N	Y	L	S	S	L	L	V	G	S	E	A	R	R	H	G	Y	Q	E	G	I	A	L	.	.	D	V	N	G	Y	I	S	E	G	A	G	E	N	L	F	E	V	K	D	G	.	.	.	.	V	L	F	T	P	P	F	T	S	S	A	L	P	G	I	T	R	D	A	I	I
Query Conservation																																			.	.																					.	.	.	.
Alig confidence																																			.	.																					.	.	.	.
Template Conservation
Template Sequence		G	G	T	G	A	A	K	F	G	G	N	Y	A	A	S	L	L	A	Q	A	Q	A	A	E	M	G	C	D	Q	V	V	W	L	D	A	I	E	R	R	Y	V	E	E	M	G	G	M	N	L	F	F	V	F	G	S	G	G	S	A	R	L	V	T	P	E	L	S	G	S	L	L	P	G	I	T	R	D	S	L	L
Template Known Secondary structure		T	S	S	T	T	S								T	T										T	T		S							T	T	T	S		B					T	T								S		G	G	G										S	S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.																						.	.	.	.
Query SS confidence																									.	.	.	.	.	.																						.	.	.	.
Query Sequence		K	L	A	K	E	L	G	I	E	V	R	E	Q	V	L	S	R	E	S	L	Y	L	A	.	.	.	.	.	.	D	E	V	F	M	S	G	T	A	A	E	I	T	P	V	R	S	V	D	G	I	.	.	.	.	Q	V	G	E	G	R	C	G	P	V	T	K	R	I	Q	Q	A	F	F	G	L	F	T	G	E	T
Query Conservation																									.	.	.	.	.	.																						.	.	.	.
Alig confidence																									.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		Q	L	A	T	D	A	G	F	A	V	E	E	R	K	I	D	V	D	E	W	Q	K	K	A	G	A	G	E	I	T	E	V	F	A	C	G	T	A	A	V	I	T	P	V	S	H	V	K	H	H	D	G	E	F	T	I	A	D	G	Q	P	G	E	I	T	M	A	L	R	D	T	L	T	G	I	Q	R	G	T	F
Template Known Secondary structure							T	T									B										T	T										T	T	T											T	T						T	T	S	S																		T	S	S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	K	W	G	W	L	D	Q	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	T	H	G	W	M	A	R	L	N
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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