Job Description P0AB80 Confidence 100.00% Date Thu Jan 5 11:14:50 GMT 2012 Rank 7 Aligned Residues 273 % Identity 29% Template c3cswB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative branched-chain-amino-acid aminotransferase; PDBTitle: crystal structure of a putative branched-chain amino acid2 aminotransferase (tm0831) from thermotoga maritima at 2.15 a3 resolution Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Y	I	W	F	N	G	E	M	V	R	W	E	D	A	K	V	H	V	M	S	H	A	L	H	Y	G	T	S	V	F	E	G	I	R	C	Y	D	S	H	K	G	P	V	V	F	R	H	R	E	H	M	Q	R	L	H	D	S	A	K	I	Y	R	F	P	V	S	Q	S	I	D	E	L	M	E	A	C	R	D
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		H	V	L	I	W	W	R	G	K	F	R	R	A	D	E	I	S	L	D	F	S	L	F	E	K	S	L	Q	G	A	V	Y	E	T	L	R	T	Y	S	R	A	.	.	.	.	P	F	A	A	Y	K	H	Y	T	R	L	K	R	S	A	D	F	F	N	L	P	L	S	L	S	F	D	E	F	T	K	V	L	K	A
Template Known Secondary structure								T	T					S	S													T	T											T	T		.	.	.	.		T	T															T	T				S	S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	R	K	N	N	L	T	S	A	Y	I	R	P	L	I	F	V	G	D	V	G	M	G	V	N	P	P	A	G	Y	S	T	D	V	I	I	A	A	F	P	W	G	A	Y	L	G	A	E	A	L	E	Q	G	I	D	A	M	V	S	S	W	N	R	A	A	P	N	T	I	P	T	A	A	K	A	G	G	N	Y
Query Conservation
Alig confidence								.																.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																				.
Template Conservation								.																.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																				.
Template Sequence		G	A	D	E	F	K	.	Q	E	V	R	I	K	V	Y	L	F	P	D	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	V	L	F	V	F	S	P	L	N	I	P	D	.	.	.	.	L	E	T	G	V	E	V	K	I	S	N	V	R	R	I	P	D	L	S	.	T	P	P	A	L	K	I	T	G	R
Template Known Secondary structure				T	T		S	.	S										T	T	T			.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.		T	T								S	S					T	T	T	.	S		T	T			B	T	T
Template Predicted Secondary structure								.																.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																				.
Template SS confidence
		76	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.													.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	S	L	L	V	G	S	E	A	R	R	H	G	Y	Q	E	G	I	A	L	D	V	N	G	Y	I	S	E	G	A	G	E	N	L	F	E	V	K	D	G	V	L	F	T	P	P	F	T	S	S	A	L	P	G	I	T	R	D	A	I	I	K	L	A	K	E	L	G	I	E	V	R	E	Q	V	L	S	R	E
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		T	D	I	V	L	A	R	R	E	I	.	.	V	D	C	Y	D	V	I	L	L	G	L	N	G	Q	V	C	E	G	S	F	S	N	V	F	L	V	K	E	G	K	L	I	T	P	S	L	D	S	G	I	L	D	G	I	T	R	E	N	V	I	K	L	A	K	S	L	E	I	P	V	E	E	R	V	V	W	V	W
Template Known Secondary structure									T	T		.	.	S	S	S	S							T	T	S	B					S	S	S							T	T							G	G	G	T																	T	T									B
Template Predicted Secondary structure												.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Y	L	A	D	E	V	F	M	S	G	T	A	A	E	I	T	P	V	R	S	V	D	G	I	Q	V	G	E	G	R	C	G	P	V	T	K	R	I	Q	Q	A	F	F	G	L	F	T	G	E	T	E	D	K	W	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	F	E	A	D	E	X	F	L	T	H	T	S	A	G	V	V	P	V	R	R	L	N	E	H	S	F	F	E	E	E	P	G	P	V	T	A	T	L	X	E	N	F	E	P	F	V	L	N	L	E	E	N	W	V	G
Template Known Secondary structure							S							T	T	T									T	T			S		S	S	S																	T	T		G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions