Job Description P0AB80 Confidence 100.00% Date Thu Jan 5 11:14:50 GMT 2012 Rank 5 Aligned Residues 293 % Identity 28% Template c2abjG_ PDB info PDB header:transferase Chain: G: PDB Molecule:branched-chain-amino-acid aminotransferase, cytosolic; PDBTitle: crystal structure of human branched chain amino acid transaminase in a2 complex with an inhibitor, c16h10n2o4f3scl, and pyridoxal 5'3 phosphate. Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		T	K	K	A	D	Y	I	W	F	N	G	E	M	V	R	W	E	D	A	K	V	H	V	M	S	H	A	L	H	Y	G	T	S	V	F	E	G	I	R	C	Y	D	S	H	K	G	P	V	.	V	F	R	H	R	E	H	M	Q	R	L	H	D	S	A	K	I	Y	R	F	P	V	S	Q	S	I	D	E	L	M	E
Query Conservation																																																		.
Alig confidence																																																		.																						.
Template Conservation																																																																								.
Template Sequence		E	W	S	S	E	F	G	W	E	K	P	H	I	K	P	L	Q	N	L	S	L	H	P	G	S	S	A	L	H	Y	A	V	E	L	F	E	G	L	K	A	F	R	G	V	D	N	K	I	R	L	F	Q	P	N	L	N	M	D	R	M	Y	R	S	A	V	R	A	T	L	P	.	V	F	D	K	E	E	L	L	E
Template Known Secondary structure					T	T	T																	T	T						S														T	T	S						S																T			.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		A	C	R	D	V	I	R	K	N	N	.	.	.	.	.	.	.	L	T	S	A	Y	I	R	P	L	I	F	V	G	D	V	G	M	G	V	N	P	P	A	G	Y	S	T	D	V	I	I	A	A	F	P	W	G	A	Y	L	G	A	E	A	L	E	Q	G	I	D	A	M	V	S	S	W	N	R	A	A	P	N	T
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																								.	.															.	.	.	.	.	.	.
Template Conservation																																										.	.															.	.	.	.	.	.	.
Template Sequence		C	I	Q	Q	L	V	K	L	D	Q	E	W	V	P	Y	S	T	S	A	S	L	Y	I	R	P	A	F	I	G	T	E	P	S	L	G	V	K	K	P	T	.	.	K	A	L	L	F	V	L	L	S	P	V	G	P	F	.	.	.	.	.	.	.	N	P	V	S	L	W	A	N	P	K	Y	V	R	A	W	K	G
Template Known Secondary structure										T	G	G	G	S		S	S	T	T															S		S	S	S			S	.	.															.	.	.	.	.	.	.									T	T			S			T	T
Template Predicted Secondary structure																																										.	.															.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																		.	.	.	.	.
Query SS confidence																																			.																		.	.	.	.	.
Query Sequence		I	P	T	A	A	K	A	G	G	N	Y	L	S	S	L	L	V	G	S	E	A	R	R	H	G	Y	Q	E	G	I	A	L	D	.	V	N	G	Y	I	S	E	G	A	G	E	N	L	F	E	V	K	.	.	.	.	.	D	G	V	L	F	T	P	P	F	T	S	S	A	L	P	G	I	T	R	D	A	I	I	K
Query Conservation																																			.																		.	.	.	.	.
Alig confidence																																			.																		.	.	.	.	.
Template Conservation
Template Sequence		G	T	G	D	C	K	M	G	G	N	Y	G	S	S	L	F	A	Q	C	E	D	V	D	N	G	C	Q	Q	V	L	W	L	Y	G	R	D	H	Q	I	T	E	V	G	T	M	N	L	F	L	Y	W	I	N	E	D	G	E	E	E	L	A	T	P	P	L	D	G	I	I	L	P	G	V	T	R	R	C	I	L	D
Template Known Secondary structure		S	S	T	T	S		B	T					T	T										T	T		S							T	T	T	T						T	T										T	T	S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		229	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure								.																	.	.	.	.	.	.																						.	.	.	.										.
Query SS confidence								.																	.	.	.	.	.	.																						.	.	.	.										.
Query Sequence		L	A	K	E	L	G	.	I	E	V	R	E	Q	V	L	S	R	E	S	L	Y	L	A	.	.	.	.	.	.	D	E	V	F	M	S	G	T	A	A	E	I	T	P	V	R	S	V	D	G	I	.	.	.	.	Q	V	G	E	G	R	C	G	P	.	V	T	K	R	I	Q	Q	A	F	F	G	L	F	T	G	E
Query Conservation								.																	.	.	.	.	.	.																						.	.	.	.										.
Alig confidence								.																	.	.	.	.	.	.																						.	.	.	.										.
Template Conservation
Template Sequence		L	A	H	Q	W	G	E	F	K	V	S	E	R	Y	L	T	M	D	D	L	T	T	A	L	E	G	N	R	V	R	E	M	F	S	S	G	T	A	C	V	V	C	P	V	S	D	I	L	Y	K	G	E	T	I	H	I	P	T	M	E	N	G	P	K	L	A	S	R	I	L	S	K	L	T	D	I	Q	Y	G	R
Template Known Secondary structure								S	S								B										T	T										T	T	T											T	T						T	T	G	G	G	T	T															T	T	S
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	D	K	W	G	W	L	D	Q	V
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		E	E	S	.	.	D	W	T	I	V	L
Template Known Secondary structure		S			.	.	T	T
Template Predicted Secondary structure					.	.
Template SS confidence
		375	.	.			.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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