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Job DescriptionP0AB80
Confidence100.00%DateThu Jan 5 11:14:50 GMT 2012
Rank2Aligned Residues304
% Identity48%Templatec1wrvB_
PDB info PDB header:transferaseChain: B: PDB Molecule:branched-chain amino acid aminotransferase; PDBTitle: crystal structure of t.th.hb8 branched-chain amino acid2 aminotransferase
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  KKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEAC
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Template Sequence  IKAGLIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAI
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STT
GGG



TT




TTTT



S
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  RDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGG
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Template Sequence  KEVVRRNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSSWARFPANVMPGKAKVGG
Template Known Secondary structure  TT
SS

SS

SS

GGG
S


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SS
B

TTTS
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BGG
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  NYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLS
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Template Sequence  NYVNSALAKMEAVAAGADEALLLDEEGYVAEGSGENLFFVRDGVIYALEHS. VNLEGITRDSVIRIAKDLGYEVQVVRAT
Template Known Secondary structure  GTT
SBTTSSSS
TT

T.TS


TT



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   163......170.........180.........190.........200.........210... ......220.........230.........240.
 
   244.....250.........260.........270.........280.........290.........300........
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Query Sequence  RESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN
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Template Sequence  RDQLYMADEVFMTGTAAEVTPVSMIDWRPIGKGTAGPVALRLREVYLEAVTGRRPEYEGWLTYVN
Template Known Secondary structure  T
STTTTT
TTSS

TT

GGGGGG

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   242.......250.........260.........270.........280.........290.........300......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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