Return to main results Retrieve Phyre Job Id

Job DescriptionP76339
Confidence98.36%DateThu Jan 5 12:21:56 GMT 2012
Rank38Aligned Residues96
% Identity17%Templated1kija2
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA gyrase/MutL, N-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   349350.........360.........370.........380.........390........ .400.........410. ...
Predicted Secondary structure 



















........









......


Query SS confidence 

















































. . . . . . . .












. . . . . .


Query Sequence  LQRMLSNLIVNAIRYSPEKSRIHITSFLDTNSYLNIDIASPGTKINEPEK. . . . . . . . LFRRFWRGDNSRH. . . . . . SVG
Query Conservation 
  

 


 

 
       
 
         
 
 
 
 

       ........




     
  ......  
Alig confidence 

















































........












......


Template Conservation 
  

 


 




     

 
 
 
     
 
 


 

                      


          
 
Template Sequence  YHHLFKEILDNAVDEALAGYATEILVRLNEDGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQGAYKVSGGL
Template Known Secondary structure  TTS


TTS

SS



STTTTSS


SGGGGSS



S
S
Template Predicted Secondary structure 





































Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   415....420.........430.........440........
Predicted Secondary structure 








Query SS confidence 

































Query Sequence  QGLGLSLVKAIAELHGGSATYHYLNKHNVFRITL
Query Conservation   



 

  

  


 
 
 
   

 
 
 
Alig confidence 












....
















Template Conservation   
 

  
   
 ....   
             
Template Sequence  HGVGASVVNALSE. . . . WTVVEVFREGKHHRIAF
Template Known Secondary structure  STTST....TT
Template Predicted Secondary structure 



....


Template SS confidence 

































   115....120....... ..130.........140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions