Return to main results Retrieve Phyre Job Id

Job DescriptionP76339
Confidence99.94%DateThu Jan 5 12:21:56 GMT 2012
Rank10Aligned Residues120
% Identity19%Templated1jm6a2
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase alpha-ketoacid dehydrogenase kinase, C-terminal domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   329330.........340.........350.........360......... 370......... 380.........390.........400
Predicted Secondary structure 
























.......


.






Query SS confidence 








































. . . . . . .









.




















Query Sequence  EKEICFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSR. . . . . . . IHITSFLDTN. SYLNIDIASPGTKINEPEKLF
Query Conservation                  
   
  

 


 

 
       .......
 
       .  
 
 
 
 

       

Alig confidence 








































.......









.




















Template Conservation               
      
  

 


 


  
            
 
          
 
 
 
 

  
    

Template Sequence  QEVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLF
Template Known Secondary structure  SSSTTS



S
TTS



SS
S



GGGTTGGG
Template Predicted Secondary structure 


























Template SS confidence 















































































   1217..1220.........1230.........1240.........1250.........1260.........1270.........1280.........1290......
 
   401........410.........420.........430....... ..440.........450
Predicted Secondary structure 
















.




Query SS confidence 




































.












Query Sequence  RRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHY. LNKHNVFRITLPQ
Query Conservation 


     
    
 



 

  

  


 
 
 
.   

 
 
 

 
Alig confidence 








..

























.












Template Conservation    
      ..  
 



 
   

    
 
 
 
  
 

 
 
 

 
Template Sequence  SYMYSTAPT. . PAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKA
Template Known Secondary structure 
TT


S

..


SS
TT
TTTS
Template Predicted Secondary structure 






..













Template SS confidence 


















































   1297..1300..... ....1310.........1320.........1330.........1340.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions