Job Description P76339 Confidence 99.96% Date Thu Jan 5 12:21:56 GMT 2012 Rank 8 Aligned Residues 220 % Identity 22% Template c3a0rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) Resolution 3.80 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	N	K	M	H	H	A	L	V	K	D	F	E	R	L	S	Q	F	A	D	D	L	A	H	E	L	R	T	P	I	N	A	L	L	G	Q	N	Q	V	T	L	S	Q	T	R	S	I	A	E	Y	Q	K	T	I	A	G	N	I	E	E	L	E	N	I	S	R	L	T	E	N	I	L	F	L	A	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	K	Y	E	E	E	R	K	R	R	E	R	L	S	I	L	G	E	M	T	A	R	V	A	H	E	I	R	N	P	I	T	I	I	G	G	F	I	M	R	M	K	K	H	L	D	D	P	E	T	L	K	K	Y	I	N	I	I	T	N	E	L	S	R	L	E	T	I	V	K	E	I	L	E	Y	S	K	E	R
Template Known Secondary structure		T	T	T	T	T	T	T	T	T																																		T	T	S		S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	N	V	L	V	K	L	D	S	L	S	L	N	K	E	V	E	N	L	L	D	Y	L	E	Y	L	S	D	E	K	E	I	C	F	K	V	E	C	N	Q	Q	I	F	A	D	K	I	L	L	Q	R	M	L	S	N	L	I	V	N	A	I	R	Y	S	P	E	K	S	R	I	H	I	T	S	F	L	D	T	N
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		V	L	E	F	T	.	E	F	N	L	N	E	L	I	R	E	V	Y	V	L	F	E	E	K	I	R	K	M	N	I	D	F	C	F	E	T	D	N	E	D	L	R	V	E	A	D	R	T	R	I	K	Q	V	L	I	N	L	V	Q	N	A	I	E	A	T	G	E	N	G	K	I	K	I	T	S	E	D	M	Y	T
Template Known Secondary structure							.																				T	T	T	T								S		S																				T					T	T		T	T											T	T
Template Predicted Secondary structure							.
Template SS confidence
		603	.	.	.	.		.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
			380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure		.																																																	.
Query SS confidence		.																																																	.
Query Sequence		.	S	Y	L	N	I	D	I	A	S	P	G	T	K	I	N	E	P	E	K	L	F	R	R	F	W	R	G	D	N	S	R	H	S	V	G	Q	G	L	G	L	S	L	V	K	A	I	A	E	.	L	H	G	G	S	A	T	Y	H	Y	L	N	K	H	N	V	F	R	I	T	L	P	Q
Query Conservation		.																																																	.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.														.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	R	V	S	V	W	N	S	G	P	P	I	P	E	E	L	K	E	K	I	F	S	P	F	F	.	.	.	.	.	.	.	.	.	.	T	T	L	G	L	S	I	C	R	K	I	I	E	D	E	H	G	G	K	I	W	T	E	N	R	E	N	G	V	V	F	I	F	E	I	P	K
Template Known Secondary structure											S					G	G	G	G	T	T	T	S	S	S			.	.	.	.	.	.	.	.	.	.						T									T	T		S	B							S	S										S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		682	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.											.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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