Job Description P76339 Confidence 100.00% Date Thu Jan 5 12:21:56 GMT 2012 Rank 4 Aligned Residues 276 % Identity 16% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	V	L	S	P	L	L	I	R	T	G	L	R	E	I	K	K	L	S	G	V	T	E	A	L	N	Y	N	D	S	R	E	P	V	E	V	S	A	L	P	R	E	L	K	P	L	G	Q	A	L	N	K	M	H	H	A	L	V	K	D	F	E	R	L	S	Q	F	A	D	D	L	A	H	E	L	R	T	P	I
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		E	K	T	S	F	T	F	L	R	Q	E	L	P	V	R	L	A	N	I	M	K	E	I	N	L	L	P	D	R	V	L	S	T	P	S	V	Q	L	V	Q	.	S	W	Y	V	Q	S	L	L	D	I	M	E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N
Template Known Secondary structure																									T	T	S						T	S								.												T	T	S	S			T	T	S	T	T	T	T														T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.								.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																																															.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.																																															.	.	.	.	.
Query Sequence		N	A	L	L	G	Q	N	Q	V	T	.	.	.	.	.	.	.	L	S	Q	T	R	S	I	A	E	Y	Q	K	T	I	A	G	N	I	E	E	L	E	N	I	S	R	L	T	E	N	I	L	F	L	A	R	A	D	K	N	N	V	L	V	K	L	.	.	.	.	.	D	S	L	S	L	N	K	E	V	E	N	L
Query Conservation												.	.	.	.	.	.	.																																															.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																															.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A
Template Known Secondary structure		T																																																			T	S	S	S		S	S		S		S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330												.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.								.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.																	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.																	.
Query Sequence		L	D	Y	L	E	Y	L	S	D	E	K	.	.	.	.	.	.	.	.	.	.	.	E	I	C	F	K	V	E	C	N	Q	Q	I	F	A	D	K	I	L	L	Q	R	M	L	S	N	L	I	V	N	A	I	R	Y	.	.	.	.	.	.	.	S	P	E	K	S	R	I	H	I	T	S	F	L	D	T	N	.	S
Query Conservation													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.																	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L
Template Known Secondary structure														S												S	S	S	T	T	S																													T	T	T	T		S													S	S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		Y	L	N	I	D	I	A	S	P	G	T	K	I	N	E	P	E	K	L	F	R	R	F	W	R	G	D	N	S	R	H	S	V	G	Q	G	L	G	L	S	L	V	K	A	I	A	E	L	H	G	G	S	A	T	Y	H	Y	.	L	N	K	H	N	V	F	R	I	T	L	P	Q	R	N
Query Conservation																																																											.
Alig confidence																															.	.	.	.																									.
Template Conservation																															.	.	.	.
Template Sequence		S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	.	.	.	.	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L	K	A	L	S
Template Known Secondary structure																		G	G	G	G		T	T	T	T					.	.	.	.		S	S													T	T									T	T											S	S	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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