Job Description P76339 Confidence 97.82% Date Thu Jan 5 12:21:56 GMT 2012 Rank 48 Aligned Residues 74 % Identity 23% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.									.	.	.	.	.	400	.	.	.	.	.	.	.	.							.	410	.
Predicted Secondary structure																					.	.	.																												.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																					.	.	.																												.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		L	Q	R	M	L	S	N	L	I	V	N	A	I	R	Y	S	P	E	K	.	.	.	S	R	I	H	I	T	S	F	L	D	T	N	S	Y	L	N	I	D	I	A	S	P	G	T	K	I	N	.	.	.	.	.	.	.	.	E	P	E	K	L	F	R	R	F	W	R	G	D	N	.	.	.	.	.	.	S	R	H
Query Conservation																					.	.	.																												.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence																					.	.	.													.															.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	.	L	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E	K	K	V	T
Template Known Secondary structure																G	G	G	T		T	T										T	T	T	T	.								S	S					S			T	T	T	T										S	S	S			S				G	G	G
Template Predicted Secondary structure																																				.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	G	Q	G	L	G	L	S	L	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	R	N	G	Y	G	A	K	L	C	N
Template Known Secondary structure		S			S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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