Job Description P76339 Confidence 97.96% Date Thu Jan 5 12:21:56 GMT 2012 Rank 47 Aligned Residues 74 % Identity 15% Template c1ea6A_ PDB info PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp Resolution 2.7 Å

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		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	Q	R	M	L	S	N	L	I	V	N	A	I	R	Y	S	P	E	K	S	R	I	H	I	T	S	F	L	D	T	N	S	Y	L	N	I	D	I	A	S	P	G	T	K	I	N	E	P	E	K	L	F	R	R	F	W	R	G	D	N	S	R	H	S	V	G	Q	G	L	G	L	S	L	V	K	A	I	A
Query Conservation
Alig confidence																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		L	S	L	S	T	A	V	K	E	L	V	E	N	S	L	D	A	G	A	.	.	T	N	I	D	L	K	L	K	D	Y	G	V	D	L	I	E	V	S	D	N	G	C	G	V	E	E	E	N	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	L	E	A	L	S	S	L	C	A	L	.
Template Known Secondary structure			S															T	T		.	.	S								T	T	T	T	S								S					T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T											.
Template Predicted Secondary structure																					.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																.	.	.	.	.	.	.	.	90	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	H	G	G	S	A	T	Y	H	Y	L	N	K	H	N
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	S	D	V	T	I	S	T	C	H	A	S	A
Template Known Secondary structure		.	.	.	.	S									T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						118	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions