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Job DescriptionP0ACP5
Confidence99.81%DateThu Jan 5 11:18:39 GMT 2012
Rank63Aligned Residues251
% Identity9%Templatec3rotA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:abc sugar transporter, periplasmic sugar binding protein; PDBTitle: crystal structure of abc sugar transporter (periplasmic sugar binding2 protein) from legionella pneumophila
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100 .........110.........120......... 130........
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Query Sequence  SRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAH. . YGYKPEMEQERLESMLSWNIDGLILTERT. . HTPRTLKMI
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Template Sequence  RDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRA
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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   139140.........150.........160.........170 .........180.........190.........200.........210.
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Query Sequence  EVAGIPVVELMDSKSPCLDIAVGFDNFEAARQ. . . . . . . MTTAIIARGHRHIAYLGARLDERTIIKQKGYEQAMLDAGLV
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Template Sequence  NKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGIF
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   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   212.......220.........230.........240.........250.........260.. .......270.........280...... .
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Query Sequence  PYSVMVEQSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLG. LKVPDDMAIAGFHGHDIGQVMEPR. . . L
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Template Sequence  . . FEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLTSQALDPLGQXLLHPDRYDFNYQPQVYSFDKTPNTVSLIHKKLVN
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   182.......190.........200.........210.........220.........230.........240.........250.........
 
   288.290.........300.........310.....
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Query Sequence  ASVLTPRERMGSIGAERLLARIRGESVT
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Template Sequence  YVXDQQPFLXGYLSITQLVLXNRYQLNP
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   260.........270.........280.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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