Job Description P0ACP5 Confidence 99.97% Date Thu Jan 5 11:18:39 GMT 2012 Rank 14 Aligned Residues 268 % Identity 17% Template c3qk7C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001 Resolution 2.70 Å

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		62	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		T	S	R	A	I	G	V	L	L	P	S	L	.	.	.	.	T	N	Q	V	F	A	E	V	L	R	G	I	E	S	V	T	D	A	H	G	Y	Q	T	M	L	A	H	Y	G	Y	K	P	E	M	E	Q	E	R	L	E	S	M	L	S	W	N	I	D	G	L	I	L	T	E	R	T	H	T	P	R	T	L	K	M
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																										.
Template Conservation																																											.
Template Sequence		R	T	D	A	I	A	L	A	Y	P	S	R	P	R	V	L	N	N	S	T	F	L	E	X	I	S	W	I	G	I	E	L	G	K	R	G	L	D	L	L	L	.	I	P	D	E	P	G	E	K	Y	Q	S	L	I	H	L	V	E	T	R	R	V	D	A	L	I	V	A	H	T	Q	P	E	D	F	R	L	Q	Y
Template Known Secondary structure												S	S	S	G	G	G																		T	T	T						.					T	T												T	T			S						S			S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.
Predicted Secondary structure																																																			.																								.
Query SS confidence																																																			.																								.
Query Sequence		I	E	V	A	G	I	P	V	V	E	L	M	D	S	K	S	P	C	L	D	I	A	V	G	F	D	N	F	E	A	A	R	Q	M	T	T	A	I	I	A	R	G	H	R	H	I	A	Y	L	.	G	A	R	L	D	E	R	T	I	I	K	Q	K	G	Y	E	Q	A	M	L	D	A	G	.	L	V	P	Y	S	V
Query Conservation																																																			.																								.
Alig confidence																																																			.																								.
Template Conservation
Template Sequence		L	Q	K	Q	N	F	P	F	L	A	L	G	R	S	H	L	P	K	P	Y	A	W	F	D	F	D	N	H	A	G	A	S	L	A	V	K	R	L	L	E	L	G	H	Q	R	I	A	F	V	S	T	D	A	R	I	S	Y	V	D	Q	R	L	Q	G	Y	V	Q	T	X	S	E	A	G	L	X	P	L	A	G	Y
Template Known Secondary structure					T	T							S					S	S																							T	T			S								S		S																	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	E	Q	S	S	S	Y	S	S	G	I	E	L	I	R	Q	A	R	R	E	Y	P	Q	L	D	G	V	F	C	T	N	D	D	L	A	V	G	A	A	F	E	C	Q	R	L	G	L	K	V	P	D	D	M	A	I	A	G	F	H	G	H	D	I	G	Q	V	M	E	P	R	L	A	S	V	L	T	P	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	K	A	D	P	T	R	P	G	G	Y	L	A	A	S	R	L	L	A	L	E	V	P	P	T	A	I	I	T	D	C	N	X	L	G	D	G	V	A	S	A	L	D	K	A	G	L	L	G	G	E	G	I	S	L	I	A	Y	D	G	L	P	D	D	S	L	L	D	I	A	V	T	P	I	V	Q	N	T	R
Template Known Secondary structure							S	S													T	S	S	S			S					S	S															T		B	S	T	T	S	B						T		S		T	T				S	S										S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
			296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	M	G	S	I	G	A	E	R	L	L	A	R	I	R	G	E	S	V	T	P	K	M	L	D	L	G	F	T	L	S	P	G	G	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	S	V	G	K	Q	I	A	S	X	I	C	D	L	L	G	G	K	D	P	K	E	L	Q	V	L	W	Q	P	E	I	G	E	G	E	T
Template Known Secondary structure		S															T	T			G	G	G													S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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