Job Description P0ACP5 Confidence 99.96% Date Thu Jan 5 11:18:39 GMT 2012 Rank 30 Aligned Residues 258 % Identity 21% Template c3huuC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcription regulator like protein; PDBTitle: crystal structure of transcription regulator like protein from2 staphylococcus haemolyticus Resolution 1.95 Å

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		62	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		T	S	R	A	I	G	V	L	L	P	S	.	.	.	.	.	L	T	N	Q	V	F	A	E	V	L	R	G	I	E	S	V	T	D	A	H	G	Y	Q	T	M	L	A	H	Y	G	Y	K	P	E	M	E	Q	E	R	L	E	S	M	L	S	W	N	I	D	G	L	I	L	T	E	R	T	H	T	P	R	T	L	K
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.
Template Conservation
Template Sequence		K	T	L	T	I	G	L	I	Q	K	S	S	A	P	E	I	R	Q	N	P	F	N	S	D	V	L	N	G	I	N	Q	A	C	N	V	R	G	Y	S	T	R	M	T	V	S	E	N	S	G	D	L	Y	H	E	V	K	T	M	I	Q	S	K	S	V	D	G	F	I	L	L	Y	S	L	K	D	D	P	I	E	H
Template Known Secondary structure											S								T	S																	T	T									S	S														T	T			S					S	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		M	I	E	V	A	G	I	P	V	V	E	L	M	D	S	K	S	P	C	L	D	I	A	V	G	F	D	N	F	E	A	A	R	Q	M	T	T	A	I	I	A	R	G	H	R	H	I	A	Y	L	G	A	R	L	D	E	R	T	I	I	.	K	Q	K	G	Y	E	Q	A	M	L	D	A	G	L	V	P	Y	S	V
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		L	L	N	E	F	K	V	P	Y	L	I	V	G	K	S	L	N	Y	E	N	I	I	H	I	D	N	D	N	I	D	A	A	Y	Q	L	T	Q	Y	L	Y	H	L	G	H	R	H	I	L	F	L	Q	E	S	G	H	Y	A	V	T	E	D	R	S	V	G	F	K	Q	Y	C	D	D	V	K	I	S	N	D	C	V
Template Known Secondary structure						T	T							S				S		S	S																							T										S	S		B																	T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	E	Q	S	S	S	Y	S	S	G	I	E	L	I	R	Q	A	R	R	E	Y	P	Q	L	D	G	V	F	C	T	N	D	D	L	A	V	G	A	A	F	E	C	Q	R	L	G	L	K	V	P	D	D	M	A	I	A	G	F	H	G	H	D	I	G	Q	V	M	E	P	R	L	A	S	V	L	T	P	R	E
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.
Template Sequence		V	I	K	S	.	.	.	.	.	.	.	.	M	N	D	L	R	D	F	I	K	Q	Y	M	P	S	V	I	I	T	S	D	V	M	L	N	M	Q	L	L	N	V	L	Y	E	Y	Q	L	R	I	P	E	D	I	Q	T	A	T	F	N	T	S	F	L	T	E	N	A	T	P	S	Q	T	S	V	N	I	N	P	D
Template Known Secondary structure					S	.	.	.	.	.	.	.	.									T	T				S					S	S														T	T			T	T	T	T							S		S					T	S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	G	S	I	G	A	E	R	L	L	A	R	I	R	G	E	S	V	T	P	K	M	L	D	L	G	F	T	L	S	P	G	G	S	I
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		V	L	G	F	T	A	G	N	T	I	I	D	V	L	R	N	F	.	.	.	.	R	E	K	L	I	S	T	Q	I	V	E	R	V	S	T
Template Known Secondary structure															T	T			.	.	.	.													T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions