Job Description P0ACP5 Confidence 99.98% Date Thu Jan 5 11:18:39 GMT 2012 Rank 8 Aligned Residues 266 % Identity 37% Template c3h5oB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator gntr; PDBTitle: the crystal structure of transcription regulator gntr from2 chromobacterium violaceum Resolution 2.30 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	I	G	V	L	L	P	S	L	T	N	Q	V	F	A	E	V	L	R	G	I	E	S	V	T	D	A	H	G	Y	Q	T	M	L	A	H	Y	G	Y	K	P	E	M	E	Q	E	R	L	E	S	M	L	S	W	N	I	D	G	L	I	L	T	E	R	T	H	T	P	R	T	L	K	M	I	E	V	A	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	V	L	V	L	I	P	S	L	A	N	T	V	F	L	E	T	L	T	G	I	E	T	V	L	D	A	A	G	Y	Q	X	L	I	G	N	S	H	Y	D	A	G	Q	E	L	Q	L	L	R	A	Y	L	Q	H	R	P	D	G	V	L	I	T	G	L	S	H	A	E	P	F	E	R	I	L	S	Q	H	A	L
Template Known Secondary structure									S		S	T	T		T	T														T	T									T	T														T	T			S						S	S				T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		P	V	V	E	L	M	D	S	K	S	P	C	L	D	I	A	V	G	F	D	N	F	E	A	A	R	Q	M	T	T	A	I	I	A	R	G	H	R	H	I	A	Y	L	G	A	R	L	D	E	R	T	I	I	K	Q	K	G	Y	E	Q	A	M	L	D	A	.	.	G	L	V	P	Y	S	V	M	V	E	Q	S	S
Query Conservation																																																																			.	.
Alig confidence										.																																																									.	.
Template Conservation										.
Template Sequence		P	V	V	Y	X	X	D	L	.	A	D	D	G	R	C	C	V	G	F	S	Q	E	D	A	G	A	A	I	T	R	H	L	L	S	R	G	K	R	R	I	G	F	L	G	A	Q	L	D	E	R	V	X	K	R	L	D	G	Y	R	A	A	L	D	A	A	D	C	R	D	A	G	L	E	W	L	D	P	Q	P	S
Template Known Secondary structure								S		.		S	S	S																						T	T			S							S																				T				G	G	G						S
Template Predicted Secondary structure										.
Template SS confidence
		151	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	S	S	G	I	E	L	I	R	Q	A	R	R	E	Y	P	Q	L	D	G	V	F	C	T	N	D	D	L	A	V	G	A	A	F	E	C	Q	R	L	G	L	K	V	P	D	D	M	A	I	A	G	F	H	G	H	D	I	G	Q	V	M	E	P	R	L	A	S	V	L	T	P	R	E	R	M	G	S	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	X	Q	X	G	A	D	X	L	D	R	A	L	A	E	R	P	D	C	D	A	L	F	C	C	N	D	D	L	A	I	G	A	L	A	R	S	Q	Q	L	G	I	A	V	P	E	R	L	A	I	A	G	F	N	D	L	Q	P	A	A	W	C	T	P	P	L	T	T	V	A	T	P	R	R	D	I	G	V	H	A
Template Known Secondary structure																		T	T							S	S														T	T			T	T	T	T						S	B							T	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	L	L	A	R	I	R	G	E	S	V	T	P	K	M	L	D	L	G	F	T	L	S	P	G	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	L	L	Q	L	I	D	G	E	E	P	A	S	R	R	A	D	L	G	F	R	L	X	L	R	R	S
Template Known Secondary structure										T	T				S		S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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