Job Description P75905 Confidence 92.04% Date Thu Jan 5 12:15:52 GMT 2012 Rank 32 Aligned Residues 212 % Identity 17% Template c3tqdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii Resolution 1.80 Å

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		77	.	.	80	.	.	.	.												.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	I	I	I	P	C	F	.	.	.	.	.	.	.	.	.	.	.	N	E	E	K	N	V	E	E	T	I	H	A	A	L	A	Q	R	Y	E	N	I	E	V	I	A	V	N	D	G	S	T	D	K	T	R	A	I	L	D	R	M	A	A	Q	I	P	H	L	R	V	I	H	L	A	Q	N	Q	G	K	A	I
Query Conservation										.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																		.											.	.	.	.	.	.	.
Template Conservation																																						.											.	.	.	.	.	.	.
Template Sequence		F	R	V	I	I	P	A	R	F	D	L	P	G	K	A	L	V	D	I	A	G	K	P	X	I	Q	H	V	Y	E	S	A	I	K	S	G	.	A	E	E	V	V	I	A	T	D	D	.	.	.	.	.	.	.	K	R	I	R	Q	V	A	E	D	F	G	A	V	V	C	X	T	S	S	D	H	Q	S	G	T	E
Template Known Secondary structure													T	T	G	G	G				T	T														T	T	.		S							S		.	.	.	.	.	.	.										T	T								T	T			S
Template Predicted Secondary structure																																						.											.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.															.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	K	T	G	A	A	A	A	K	S	E	Y	.	.	.	L	V	C	I	D	G	D	A	L	L	.	D	R	D	A	A	A	Y	I	V	E	P	M	L	Y	N	P	R	V	G	A	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	R	I	R	T	R	S	T	L	V	G	K	I	Q	V
Query Conservation															.	.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	A	E	A	A	V	A	L	G	F	E	D	D	E	I	I	V	C	L	Q	G	D	E	P	L	I	P	P	D	A	I	R	K	L	A	E	D	L	D	E	H	D	K	V	A	S	L	C	T	P	I	T	E	V	D	E	L	F	N	P	H	S	T	K	V	V	L	N	R	R	N	Y	A	L	Y	F	S	H	A
Template Known Secondary structure										T	T			T	T								T	T																																				T		T	T	S							T	T	S	B						S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		G	E	Y	S	S	I	I	G	L	I	K	R	T	Q	R	I	Y	G	N	V	F	T	V	S	G	V	I	A	A	F	R	R	S	A	L	A	E	V	G	Y	W	S	D	D	M	I	.	T	E	D	I	D	I	S	W	K	L	Q	L	N	Q	W	T	I	F	Y	E	P	R	A	L	C	W	I	L	M	P	E	T	L
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		P	I	P	W	G	R	D	T	F	S	D	K	E	N	L	Q	L	N	G	S	H	Y	R	H	V	G	I	Y	A	Y	R	V	G	F	L	E	E	Y	L	S	W	D	A	C	P	A	E	K	X	E	A	L	E	Q	L	R	I	L	W	H	G	G	R	I	H	X	V	V	A	K	S	K	C	P	P	G	V	D	T	E
Template Known Secondary structure			S	S			T	T	T	T	T		G	G	G				S	S																						S										T		T	T						T	T									S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	L	W	K	Q	R	L	R	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	L	E	R	V	R	A	Y	F
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions