Job Description P75905 Confidence 33.56% Date Thu Jan 5 12:15:52 GMT 2012 Rank 94 Aligned Residues 134 % Identity 13% Template c2uvgA_ PDB info PDB header:sugar-binding protein Chain: A: PDB Molecule:abc type periplasmic sugar-binding protein; PDBTitle: structure of a periplasmic oligogalacturonide binding2 protein from yersinia enterocolitica Resolution 2.2 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																					.																																		.	.	.
Query SS confidence																					.																																		.	.	.
Query Sequence		D	K	T	R	A	I	L	D	R	M	A	A	Q	I	P	H	L	R	V	.	I	H	L	A	Q	N	Q	G	K	A	I	A	L	K	T	G	A	A	A	A	K	S	E	Y	L	V	C	I	D	G	D	A	L	.	.	.	L	D	R	D	A	A	A	Y	I	V	E	P	M	L	Y	N	P	R	V	G	A	V	T	G
Query Conservation																					.																																		.	.	.
Alig confidence																					.																																		.	.	.																			.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		E	V	T	L	K	A	L	E	E	F	H	K	E	H	P	N	I	N	V	K	A	E	Y	T	G	W	D	G	H	L	S	R	L	T	T	Q	I	A	G	G	T	E	P	D	V	M	Q	T	N	W	N	W	L	P	I	F	S	K	D	G	T	G	F	Y	N	L	F	S	V	K	E	Q	L	D	.	.	.	.	.	.
Template Known Secondary structure																T	T										S	T	T											T	T				S						T	T							T	T	S		S	B			G	G	G	G	T	T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	R	I	R	T	R	S	T	L	V	G	K	I	Q	V	G	E	Y	S	S	I	I	G	L	I	K	R	T	Q	R	I	Y	G	N	V	F	T	V	S	G	V	I	A	A	F	R	R	S	A	L	A	E	V	G	Y	W	S	D	D	M	I	T	E	D	I	D	I	S	W	K	L	Q	L	N	Q	W	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	Q	F	D	P	K	E	L	Q	Q	T	T	V	N	G	K	L	N	G	I	P	I	S	V	T	A	R	I	F	Y	F	N	D	A	T	W	A	K	A	G	L	E	Y	P	K	T	W	D	E	L	L	A	A	G	Q	V	F	K	E	K	L	G	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S								T			T	T																									T					S	S															T		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions