Job Description P75905 Confidence 92.51% Date Thu Jan 5 12:15:52 GMT 2012 Rank 31 Aligned Residues 129 % Identity 14% Template c2gamA_ PDB info PDB header:transferase Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase; PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,2 6-n-acetylglucosaminyltransferase (c2gnt-l) in complex3 with galb1,3galnac Resolution 2.70 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		R	E	R	H	W	P	W	G	E	N	A	P	A	P	Q	L	K	D	N	P	S	I	S	I	I	I	P	C	F	N	E	E	K	N	V	E	E	T	I	H	A	A	L	A	Q	R	Y	E	.	N	I	E	V	I	A	V	N	D	G	S	T	D	K	T	R	A	I	L	D	R	M	A	A	Q	I	P	H	L	R	V
Query Conservation																																																		.
Alig confidence																						.																						.	.	.				.
Template Conservation																						.																						.	.	.
Template Sequence		F	I	R	T	R	K	Y	I	V	E	P	L	T	K	E	E	V	G	F	P	.	I	A	Y	S	I	V	V	H	H	K	I	E	M	L	D	R	L	L	R	A	I	.	.	.	Y	M	P	Q	N	F	Y	C	I	H	V	D	R	K	A	E	E	S	F	L	A	A	V	Q	G	I	A	S	C	F	D	N	V	F	V
Template Known Secondary structure							T				S								T	S		.								S	S													.	.	.			T	T	S								T	T	S														T		T	T
Template Predicted Secondary structure																						.																						.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.											.
Query SS confidence										.	.	.	.	.	.	.	.	.											.
Query Sequence		I	H	L	A	Q	N	Q	G	.	.	.	.	.	.	.	.	.	K	A	I	A	L	K	T	G	A	A	.	A	A	K	S	E	Y	L	V	C	I	D	G	D	A	L	L	D	R	D	A	A	A	Y	I	V	E	P	M	L	Y	N	P	R	V	G	A	V
Query Conservation										.	.	.	.	.	.	.	.	.											.
Alig confidence										.	.	.	.	.	.	.	.	.											.																						.
Template Conservation																																																			.
Template Sequence		A	S	Q	L	E	S	V	V	Y	A	S	W	T	R	V	K	A	D	L	N	C	M	K	D	L	Y	R	M	N	A	N	W	K	Y	L	I	N	L	C	G	M	D	F	P	I	K	T	N	L	.	E	I	V	R	K	L	K	C	S	T	G	E	N	N	L
Template Known Secondary structure			S	S						T	T	S																			S										T	T				S	S				.									T	T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions