Job Description P75905 Confidence 100.00% Date Thu Jan 5 12:15:52 GMT 2012 Rank 2 Aligned Residues 225 % Identity 19% Template c2d7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																	.																			.	.															.
Query SS confidence																			.	.	.	.	.	.	.	.	.																	.																			.	.															.
Query Sequence		Y	R	E	R	H	W	P	W	G	E	N	A	P	A	P	Q	L	.	.	.	.	.	.	.	.	.	K	D	N	P	S	I	S	I	I	I	P	C	F	N	E	E	.	K	N	V	E	E	T	I	H	A	A	L	A	Q	R	Y	E	N	I	.	.	E	V	I	A	V	N	D	G	S	T	D	K	T	R	.	A	I
Query Conservation																			.	.	.	.	.	.	.	.	.																	.																			.	.															.
Alig confidence																			.	.	.	.	.	.	.	.	.																	.																			.	.															.
Template Conservation
Template Sequence		Y	V	S	D	K	I	S	L	N	R	S	L	P	D	I	R	H	P	N	C	N	S	K	R	Y	L	E	T	L	P	N	T	S	I	I	I	P	F	H	N	E	G	W	S	S	L	L	R	T	V	H	S	V	L	N	R	S	P	P	E	L	V	A	E	I	V	L	V	D	D	F	S	D	R	E	H	L	K	K	P
Template Known Secondary structure						T	S		T	T							S		G	G	G	G	T					S	S											S	S																	S		G	G	G										S				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	M	A	A	Q	I	P	H	L	R	V	I	H	L	A	Q	N	Q	G	K	A	I	A	L	K	T	G	A	A	A	A	K	S	E	Y	L	V	C	I	D	G	D	A	L	L	D	R	D	A	A	A	Y	I	V	E	P	M	L	Y	N	P	R	V	G	A	V	T	G	N	P	R	I	R	T	R	S	T	L
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		L	E	D	Y	M	A	L	F	P	S	V	R	I	L	R	T	K	K	R	E	G	L	I	R	T	R	M	L	G	A	S	V	A	T	G	D	V	I	T	F	L	D	S	H	C	E	A	N	V	N	W	L	P	P	L	L	D	R	I	A	R	N	R	K	.	T	I	V	C	P	M	I	D	V	I	D	H	D	D	F
Template Known Secondary structure							T	T	S	T	T							S	S																	S	S							S	S					T	T		S											T	T	.												T	T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.															.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Query Sequence		V	G	K	I	Q	V	G	E	Y	S	S	I	I	G	L	I	K	R	T	Q	R	I	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	F	T	V	S	G	V	I	A	A	F	R	R	S	A	L	A	E	V	G	Y	W	S	D	D	M	I	.	.	.	T	E	D	I	D	I	S	W	K	L	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation
Template Sequence		R	Y	E	T	Q	A	G	D	A	M	R	G	A	F	D	W	E	M	Y	Y	K	R	I	P	I	P	P	E	L	Q	K	A	D	P	S	D	P	F	E	S	P	V	M	A	G	G	L	F	A	V	D	R	K	W	F	W	E	L	G	G	Y	D	P	G	L	E	I	W	G	G	E	Q	Y	E	I	S	F	K	V	W
Template Known Secondary structure							T	T	S	S							T	T										T	T	T			S	S	T	T	S					S	S			S	S	S											T	T	S	S		T	T			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Q	W	T	I	F	Y	E	P	R	A	L	C	W	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	C	G	G	R	M	E	D	I	P	C	S	R	V	G	H
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions