Job Description P75905 Confidence 85.22% Date Thu Jan 5 12:15:52 GMT 2012 Rank 48 Aligned Residues 126 % Identity 16% Template c2c0nA_ PDB info PDB header:viral protein/transferase Chain: A: PDB Molecule:a197; PDBTitle: crystal structure of a197 from stiv Resolution 1.86 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		L	D	R	M	A	A	Q	I	P	H	L	R	V	I	H	L	A	Q	N	Q	G	.	.	.	K	A	I	A	L	K	T	G	A	A	A	A	K	S	E	Y	L	V	C	I	D	G	D	A	L	L	D	R	D	A	A	A	Y	I	V	E	P	M	L	Y	N	P	R	V	G	A	V	T	G	N	P	R	I	R	T	R
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																																.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		L	I	D	F	L	V	K	N	D	I	E	Y	V	I	L	S	R	R	N	H	V	A	V	Q	R	E	I	A	L	D	X	F	L	E	X	K	D	Y	D	T	L	A	F	L	D	E	D	V	V	P	I	E	I	D	F	Q	K	V	E	A	K	F	N	E	G	Y	D	V	V	C	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T										S																	T	T									T	T																		T		S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	L	V	G	K	I	Q	V	G	E	Y	S	S	I	I	G	L	I	K	R	T	Q	R	I	Y	G	N	V	F	T	V	S	G	V	I	A	A	F	R	R	S	A	L	A	E	V	G	Y	W	S	D	D	M	I	T	E	D	I	D	I
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Y	Y	Y	L	K	T	L	R	G	Y	S	V	Y	R	K	D	W	E	K	E	I	F	D	G	E	V	N	G	C	G	L	G	F	T	F	I	K	R	E	F	L	E	K	I	K	R	P	A	F	L	A	I	G	E	D	V	Y	F
Template Known Secondary structure		.	.	.			B		T	T	S	S	S	B	S			S	S	S	B		S	S							S				S	S										T	T	S		S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions