Job Description P77704 Confidence 96.65% Date Thu Jan 5 12:31:54 GMT 2012 Rank 78 Aligned Residues 164 % Identity 19% Template d1xi3a_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.70

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.												.	.	.	.	.	140	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Query Sequence		G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	.	.	.	.	.	.	.	.	.	.	.	G	H	V	G	N	E	T	V	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	E	V	E	S	V	R	E	A	L	E	G	G	A	T	A	I	Q	M	R	I	K	N	A	P	T	R	E	M	Y	E	I	G	K	T	L	R	Q	L	T	R	E	Y	D	A	L	F	F	V	D	D	R	V	D	V	A	L	A	V	D	A	D	G	V	Q	L	G	P	E	D	M	P	I	E	V	A	K	E	I
Template Known Secondary structure		S												T	T		S								S																				T	T							S									T		S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I	K	T	A	I	S	L
Query Conservation
Alig confidence																				.													.	.	.	.																																.	.
Template Conservation																				.													.	.	.	.																																.	.
Template Sequence		A	P	N	L	I	I	G	A	S	V	Y	S	L	E	E	A	L	E	.	A	E	K	K	G	A	D	Y	L	G	A	G	.	.	.	.	S	V	F	P	T	D	A	R	V	I	G	L	E	G	L	R	K	I	V	E	S	V	K	I	P	V	V	A	I	G	G	.	.	I	N	K	D	N	A	R	E	V	L	K	T
Template Known Secondary structure			T	T	S							S	S							.					T		S						.	.	.	.		S	S																				S	S						S	S	.	.			T	T	T						T	T
Template Predicted Secondary structure																				.													.	.	.	.																																.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	A	K	I	N	I	H	T	E	L	C	Q	A	A	M	V	A	V	K	E	N	Q	D	Q	P	F	L	H	L	E	R	E	V	R	K	A	V	K	E	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	D	G	I	A	V	I	S	A	V	M	G	.	.	.	.	.	.	.	.	.	.	A	E	D	V	R	K	A	T	E	E	L	R	K	I	V	E	E	V
Template Known Secondary structure		T		S					S					T	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions