Job Description P77704 Confidence 94.77% Date Thu Jan 5 12:31:54 GMT 2012 Rank 140 Aligned Residues 189 % Identity 20% Template d1w0ma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.5

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																						.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	S	P	V	I	I	S	F	G	T	G	F	V	G	N	T	S	F	E	.	.	D	F	S	H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		M	R	L	P	I	L	I	I	N	F	K	A	Y	G	E	A	A	G	K	R	A	V	E	L	A	K	A	A	E	R	A	A	R	E	L	G	V	N	I	V	V	A	P	N	H	.	L	E	L	G	L	V	S	Q	S	V	D	I	P	V	Y	A	Q	G	A	D	V	E	A	G	G	A	H	T	A	H	V	S	L	E
Template Known Secondary structure				S	S							T	T		G	G	G	S	T																		T									G	.	G	G						T	T		S	S		B			S			S	B	S	S		S	S		T	T			B
Template Predicted Secondary structure																																															.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
							96	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.											.	.
Query SS confidence		.	.	.	.	.											.	.
Query Sequence		.	.	.	.	.	G	M	N	S	L	M	R	D	A	S	.	.	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	R	T	G	C	D
Query Conservation		.	.	.	.	.											.	.
Alig confidence		.	.	.	.	.											.	.							.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																									.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		N	I	K	E	A	G	G	S	G	V	I	L	N	H	S	E	A	P	L	K	L	N	D	.	.	.	.	L	A	R	L	V	A	K	A	K	S	L	G	L	D	V	V	V	C	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	R	T	S	L	A	A	A	A	.	L	G	P	H
Template Known Secondary structure							T									T	T	S							.	.	.	.											T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										.	T			S
Template Predicted Secondary structure																									.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																			.	.	.	.	.	.	.	130	.	.		.	.	.	.
		169	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		S	L	A	V	.	.	.	.	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I	K	T	A	I	S	L	G	I	A	K	I	N	I	H	T	E	L	C	Q	A	A	M	V	A	V	K	E	N
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																																																															.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	A	V	E	P	P	E	L	I	G	T	G	R	A	V	S	R	Y	K	P	E	A	I	V	E	T	V	G	L	V	S	R	H	F	P	E	V	S	V	I	T	G	A	G	I	E	S	G	D	D	V	A	A	A	L	R	L	G	T	R	G	V	L	L	A	S	A	A	V	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								G	G	G	T	T	T	S																							T	T	S						S	S			S										T	T		S										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	Q	P	F	L	H	L	E	R	E	V	R	K	A	V	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	K	D	P	Y	A	K	I	V	E	L	A	K	P	L	S	E
Template Known Secondary structure		T		S	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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