Job Description P77704 Confidence 96.82% Date Thu Jan 5 12:31:54 GMT 2012 Rank 74 Aligned Residues 169 % Identity 18% Template d1vc4a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.80

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	G	T	G	F	V	G	N	T	S	F	E	D	F	S	H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	F	D	F	E	E	N
Query Conservation
Alig confidence																														.	.	.	.													.																																.	.	.	.
Template Conservation																														.	.	.	.													.																																.	.	.	.
Template Sequence		A	A	L	A	Y	A	R	G	G	A	R	A	V	S	V	L	T	E	P	H	R	F	G	G	S	L	L	D	.	.	.	.	L	K	R	V	R	E	A	V	D	L	P	L	.	L	R	K	D	F	V	V	D	P	F	M	L	E	E	A	R	A	F	G	A	S	A	A	L	L	I	V	A	L	L	G	.	.	.	.
Template Known Secondary structure									T	T		S									S	S	S							.	.	.	.										S			.				S				S										T	T		S										G	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.													.																																.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	.	F	E	V
Query Conservation																																																																														.
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.									.	.	.														.
Template Conservation		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.									.	.	.
Template Sequence		.	E	L	T	G	A	Y	L	E	E	A	R	R	L	G	L	E	A	L	V	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	E	R	E	L	E	I	A	L	E	.	A	G	A	E	V	L	G	I	.	.	.	N	N	R	D	L	A	T	L	H	I	N	L	E	T	A	P	R
Template Known Secondary structure		.	G	G												T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										.		T		S					.	.	.		S	B		T	T	T			B		T	T
Template Predicted Secondary structure		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.									.	.	.
Template SS confidence
			141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																			.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I	K	T	A	I	S	L	G	I	A	K	I	N	I	H	T	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	R	L	A	R	K	R	G	F	G	G	V	L	V	A	E	S	G	Y	S	R	K	E	E	L	K	A	L	E	G	L	F	D	A	V	L	I	G	T	S	L
Template Known Secondary structure									T	T			S						S				S						T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions