Return to main results Retrieve Phyre Job Id

Job DescriptionP77704
Confidence70.47%DateThu Jan 5 12:31:54 GMT 2012
Rank304Aligned Residues100
% Identity15%Templated1tv5a1
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   155....160.........170.... .....180..... ....190.........200 .........210.........
Predicted Secondary structure 



...........










..



..







Query SS confidence 



















. . . . . . . . . . .










. .














. .


















Query Sequence  PDQAAEFVERTGCDSLAVAI. . . . . . . . . . . GNQHGVYTSEP. . QLNFEVVKRVRDAVS. . VPLVLHGASGISDADIKTA
Query Conservation 



  

  



 




...........

 

 
   
.. 

   
  
   
 ..









        
Alig confidence 



















...........










..














..











.





Template Conservation     

  
   
 



  

              




  
 
 

  
  
       



  


   . 

   
Template Sequence  KKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG. LDALEK
Template Known Secondary structure  TT
S


BS




GGGTT

STTT
S
SS

S.
Template Predicted Secondary structure 

































.
Template SS confidence 















































































   439440.........450.........460.........470.........480.........490.........500.........510. ......
 
   220.........230.........240.........250.....
Predicted Secondary structure 






Query SS confidence 



































Query Sequence  ISLGIAKINIHTELCQAAMVAVKENQDQPFLHLERE
Query Conservation 
  

 



 
 
  
                   
Alig confidence 



































Template Conservation 
 


  


 

    

     
  

   
   
Template Sequence  IEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQR
Template Known Secondary structure  TTSGGG
Template Predicted Secondary structure 







Template SS confidence 



































   518.520.........530.........540.........550...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions