Job Description P77704 Confidence 97.27% Date Thu Jan 5 12:31:54 GMT 2012 Rank 59 Aligned Residues 224 % Identity 11% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																		.	.	.	60	.	.
Predicted Secondary structure																.							.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.							.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	R	Y	W	E	N	D	A	T	N	K	H	Y	.	A	I	A	H	F	N	.	.	.	V	W	N	A	E	M	L	M	G	V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	G	T	G	F	V	G	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	E	D	F	S
Query Conservation																.							.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.							.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	S	D	T	M	A	A	L	M	A	K	G	K	T	A	F	I	P	Y	I	T	A	G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V	L
Template Known Secondary structure													T	T										T	T	S	S															T	T		S	S								S			T	T	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	.	.	.	.	.	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.					.	.	.	.																		.	.						.	.	.	.																					.	.
Template Conservation																												.	.	.	.																		.	.						.	.	.	.																					.	.
Template Sequence		E	M	L	R	E	V	T	P	E	L	S	C	P	V	V	L	L	S	Y	Y	K	P	I	M	F	R	.	.	.	.	S	L	A	K	M	K	E	A	G	V	H	G	L	I	V	P	D	.	.	L	P	Y	V	A	.	.	.	.	A	H	S	L	W	S	E	A	K	N	N	N	L	E	L	V	L	L	T	T	.	.
Template Known Secondary structure								G	G	G		S	S								S					S		.	.	.	.		T						T	T							T	T	.	.			T	T	T	.	.	.	.											T	T									.	.
Template Predicted Secondary structure																												.	.	.	.																		.	.						.	.	.	.																					.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.
Predicted Secondary structure																																																					.	.	.																								.
Query SS confidence																																																					.	.	.																								.
Query Sequence		G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	.	.	.	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	A	S	G	I	.	S	D
Query Conservation																																																					.	.	.																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.															.	.	.																	.	.						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																																		.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	P	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y	L	.	.	V	S	V	N	G	V	T	G	P	R	A	N	V	N	P	R	V	E	S	L	I	Q	E	V	K	K	V	T	N	K	P	V	A	.	.	V	G	F	G	I	S	K	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S														S					.	.			S	S			B		T	T	S		B		T														S	S				.	.			S				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																																		.	.
Template SS confidence
																152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	K	T	A	I	S	L	G	I	A	K	I	N	I	H	T	E	L	C	Q	A	A	M	V	A	V	K	E	N	Q	D	Q	P	F	L	H	L	E	R	E	V	R	K	A	V	K	E	R
Query Conservation
Alig confidence																												.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S	A	M	V	R	Q	L	G	E	.	.	.	.	.	.	A	A	S	P	K	Q	G	L	R	R	L	E	E	Y	A	R	G	M
Template Known Secondary structure										T	T		S														S	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions