Job Description P77704 Confidence 76.23% Date Thu Jan 5 12:31:54 GMT 2012 Rank 284 Aligned Residues 186 % Identity 17% Template d1d3ga_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.60

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																											.	.	.	.	.																					.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.																											.	.	.	.	.																					.	.	.	.
Query Sequence		V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	.	.	.	.	.	.	.	D	H	G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	.	.	.	.	.	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	.	.	.	.	G	I	P
Query Conservation																	.	.	.	.	.	.	.																											.	.	.	.	.																					.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																											.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		Q	A	K	L	T	E	D	G	L	P	L	G	V	N	L	G	K	N	K	T	S	V	D	A	A	E	D	Y	A	E	G	V	R	V	L	G	P	L	A	D	Y	L	V	V	N	V	S	S	P	N	T	A	G	L	G	K	A	E	L	R	R	L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A
Template Known Secondary structure								T	T											T	T		S														G	G	G		S						S			T	T	S	T	T																			T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.														.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	R	T	G	C	D	S	L	A	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	.	.	F	E	V	V	K	R
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	V	K	I	.	.	.	.	.	.	.	.	.	.	.	.	A	P	D	L	T	S	Q	D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.		S																		T										B	S				T	T				T	T	T	T	S	S	S					G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.													.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		195	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		V	R	D	A	V	.	.	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I	K	T	A	I	S	L	G	I	A	K	I	N	I	H	T	E	L	C	Q	A	A	M	V	A	V	K	E	N	Q	D	Q	P	F	L	H	L	E	R	E	V	R	K	A	V	K	E	R	A
Query Conservation							.	.
Alig confidence							.	.														.
Template Conservation																						.
Template Sequence		M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	.	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	P	P	V	V	G	K	V	K	R	E	L	E	A	L	L	K	E	Q	G	F	G	G	V	T	D	A	I
Template Known Secondary structure						T	T	T		S						S	S			S		.										T		S					S								T																	T	T		S	S					T
Template Predicted Secondary structure																						.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions