Job Description P77704 Confidence 40.95% Date Thu Jan 5 12:31:54 GMT 2012 Rank 419 Aligned Residues 145 % Identity 8% Template c3obeB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	.	.	.	.	.	.	.	M	R	D	A	S	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																															.
Template Conservation																																																						.
Template Sequence		P	N	G	L	N	R	L	A	K	A	G	Y	T	D	L	E	I	F	G	Y	R	E	D	T	G	K	F	G	D	Y	N	N	T	T	F	I	A	S	K	D	Y	K	K	X	V	D	D	A	G	L	R	I	.	S	S	S	H	L	T	P	S	L	R	E	Y	T	K	E	N	X	P	K	F	D	E	F	W	K	K	A
Template Known Secondary structure											T	T									B		T	T	T	S		B									B												T	T				.				B				S						G	G	G
Template Predicted Secondary structure																																																						.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																							.	.	.	210	.	.	.	.
Predicted Secondary structure																																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	F	V	E	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	.	.	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	S	G	I	S	D	A
Query Conservation																																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	I	H	A	E	L	G	V	S	C	X	V	Q	P	S	L	P	R	I	E	N	E	D	D	A	K	V	V	S	E	I	F	N	R	A	G	E	I	T	K	K	A	G	I	L	W	G	Y	H	N	H	S	N	E	F	K	R	V	L	K	A	G	E	K	P	E	Q	N	P	N	P	W	A	P	P	K	G	T	Y
Template Known Secondary structure									T		S											S	S																				T	T	T									S	G	G	G	S					T	T					S	S			S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		215	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		D	I	K	T	A	I	S	L	.	.	.	G	I	A	K	I	N	I	H	T
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		I	E	E	L	F	L	K	N	T	D	P	D	K	V	X	F	E	L	D	V
Template Known Secondary structure										S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions