Job Description P77704 Confidence 88.11% Date Thu Jan 5 12:31:54 GMT 2012 Rank 218 Aligned Residues 179 % Identity 17% Template c3noyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) Resolution 2.70 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	W	N	A	E	M	L	M	G	V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	G	T	G	F	V	G	N	T	S	F	E	D	F	S	H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.															.	.
Template Conservation																																		.	.	.	.	.	.	.															.	.
Template Sequence		K	T	H	D	V	E	A	T	L	N	Q	I	K	R	L	Y	E	A	G	C	E	I	V	R	V	A	V	P	H	K	E	D	.	.	.	.	.	.	.	V	E	A	L	E	E	I	V	K	K	S	P	M	P	.	.	V	I	A	D	I	H	F	A	P	S	Y	A	F	L	S	M	E	K	G	V	H	G	I	R	I
Template Known Secondary structure			T	T															T	T										S				.	.	.	.	.	.	.												S	S		.	.							S											T	T		S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.															.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.									.	.	.
Query SS confidence																																																						.	.	.									.	.	.
Query Sequence		D	A	S	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	.	.	.	P	D	Q	A	A	E	F	V	.	.	.	E	R	T	G	C	D	S	L	A	V	A	I	G	N
Query Conservation																																																						.	.	.									.	.	.
Alig confidence															.	.	.													.	.																							.	.	.									.	.	.													.	.
Template Conservation															.	.	.													.	.																																																	.	.
Template Sequence		N	P	G	N	I	G	K	E	E	I	V	R	E	.	.	.	I	V	E	E	A	K	R	R	G	V	A	V	.	.	R	I	G	V	N	S	G	S	L	E	K	D	L	L	E	K	Y	G	Y	P	S	A	E	A	L	A	E	S	A	L	R	W	S	E	K	F	E	K	W	G	F	T	N	Y	K	V	S	I	.	.
Template Known Secondary structure							S								.	.	.									T				.	.						G	G	G										S	S																				T	T									.	.
Template Predicted Secondary structure															.	.	.													.	.																																																	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	.	.	.	.	H	G	A	S	G	I	S	D	A	D	I	K	T	A	I	S	L	G
Query Conservation																															.	.	.	.
Alig confidence		.	.	.	.																										.	.	.	.				.	.
Template Conservation		.	.	.	.																																	.	.
Template Sequence		.	.	.	.	K	G	S	D	V	L	Q	N	V	R	A	N	L	I	F	A	E	R	T	D	V	P	L	H	I	G	I	T	E	A	G	M	.	.	G	T	K	G	I	I	K	S	S	V	G	I	G
Template Known Secondary structure		.	.	.	.			S	S																								S	S			S	.	.
Template Predicted Secondary structure		.	.	.	.																																	.	.
Template SS confidence
						176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions