Job Description P77704 Confidence 65.47% Date Thu Jan 5 12:31:54 GMT 2012 Rank 330 Aligned Residues 131 % Identity 14% Template c3n4eA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, c-terminal PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from paracoccus denitrificans pd1222 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.	.	.	.	.	80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																							.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.																							.	.	.	.	.	.
Query Sequence		T	V	P	V	I	T	H	W	D	H	G	R	S	.	.	.	.	.	.	.	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	F	.	.	.	.	.	.	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N
Query Conservation															.	.	.	.	.	.	.																							.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	P	C	Y	S	S	I	G	G	N	A	A	R	S	V	D	E	V	V	R	E	V	A	R	R	V	E	A	E	Q	P	A	A	V	K	I	R	W	D	G	D	R	T	R	C	D	V	D	I	P	G	D	I	A	K	A	R	A	V	R	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure													S	S	S																			S										T	T			S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	.	.	.	E	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I
Query Conservation																									.	.	.
Alig confidence															.										.	.	.													.	.	.	.	.	.	.	.	.	.																						.
Template Conservation															.																									.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		P	D	A	V	I	G	F	D	A	N	N	G	Y	.	S	V	G	G	A	I	R	V	G	R	A	L	E	D	L	G	Y	S	W	F	E	E	P	V	.	.	.	.	.	.	.	.	.	.	Q	H	Y	H	V	G	A	X	G	E	V	A	Q	R	L	D	I	T	V	S	A	.	G	E	Q	T	Y	T	L	Q	A	L
Template Known Secondary structure		S	S								T	T			.															T	T		S						S	.	.	.	.	.	.	.	.	.	.		T	T													S	S				B	.		T	T			S
Template Predicted Secondary structure															.																									.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.											.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	A	I	S	L	G	I	A	K	I	N	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	L	I	L	S	G	V	R	X	V	Q	P	D
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions