Job Description P77704 Confidence 98.14% Date Thu Jan 5 12:31:54 GMT 2012 Rank 24 Aligned Residues 180 % Identity 14% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	M	L	M	G	V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	G	F	V	G	N	T	S	F	E	D	F	S	H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	E	L	K	K	I	V	D	I	C	K	A	N	G	A	V	M	G	I	Q	L	A	H	A	G	R	K	C	N	I	S	Y	E	D	V	V	G	P	S	P	I	K	A	G	D	R	Y	K	L	P	R	E	L	S	V	E	E	I	K	S	I	V	K	A	F	G	E	A	A	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T											G	G	G				T	T	S					S	S	S			S	S	T	T	S																							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	.	.	.	G	I	P	V	E	A	E	L	G	H	V	G	N
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	R	A	N	L	A	G	Y	D	V	V	E	I	H	A	A	H	G	Y	L	I	H	E	F	L	S	P	L	S	N	K	R	K	D	E	Y	G	N	S	I	E	N	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K	P	I	F	V	R	V	S	A	D	D	Y
Template Known Secondary structure		.	.	.	.	.	.	.							T		S								T	T	S								T	T	T					S	T	T	S	S	S					T													T	S		T	T	S											S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																									.	.																				.
Query SS confidence																									.	.																				.
Query Sequence		E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	.	.	E	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	.	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I
Query Conservation																									.	.																				.
Alig confidence						.	.	.	.	.	.	.	.	.											.	.																				.																																.
Template Conservation						.	.	.	.	.	.	.	.	.																																																																.
Template Sequence		M	E	G	G	.	.	.	.	.	.	.	.	.	I	N	I	D	M	M	V	E	Y	I	N	M	I	K	D	K	V	D	L	I	D	V	S	S	G	G	L	L	N	V	D	I	N	L	Y	P	G	Y	Q	V	K	Y	A	E	T	I	K	K	R	C	N	I	K	T	S	A	V	G	L	I	T	T	Q	.	E	L	A
Template Known Secondary structure		S	T	T	S	.	.	.	.	.	.	.	.	.														T	T	T		S									S	S								T	T	T	T												T							S	S					.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																																																.
Template SS confidence
		223	.	.	.										.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.
		217	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		K	T	A	I	S	L	G	.	I	A	K	I	N	I	H	T	E	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		E	E	I	L	S	N	E	R	A	D	L	V	A	L	G	R	E	L
Template Known Secondary structure							T	T	S		S					S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions