Job Description P77704 Confidence 97.77% Date Thu Jan 5 12:31:54 GMT 2012 Rank 39 Aligned Residues 183 % Identity 17% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																														50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	A	I	A	H	F	N	V	W	N	A	E	M	L	M	G	V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	F	V	G	N	T	S	F	E	D	F	S	H	M	M	V
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	E	L	R	I	W	D	D	Q	D	L	P	A	L	K	R	I	A	D	A	I	H	E	G	G	G	L	A	G	I	E	L	A	H	N	G	M	N	A	P	N	Q	L	S	R	E	T	P	L	G	P	G	H	L	P	V	A	P	D	T	I	A	P	I	Q	A	R	A	M	T	K	Q	D	I	D	D	L	R	R
Template Known Secondary structure		S						S	S	G	G	G															T											G	G	G				T	T	T							S	S	S					S	S				S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.																			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																										.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	.	.	.	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P
Query Conservation																																										.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	H	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T		S								T	T		S								T	T	T					S	T	T	S	S	S					T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160																		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
					126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																							.	.																				.	.	.	.
Query SS confidence		.	.	.																																							.	.																				.	.	.	.
Query Sequence		.	.	.	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	.	.	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	.	.	.	.	S	E	P	Q	L	N	F	E	V	V	K	R	V	R
Query Conservation		.	.	.																																							.	.																				.	.	.	.
Alig confidence		.	.	.																			.	.	.	.	.	.	.	.	.												.	.																				.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.
Template Sequence		E	C	A	G	R	A	A	V	A	C	R	I	T	V	E	E	E	I	D	G	G	.	.	.	.	.	.	.	.	.	I	T	R	E	D	I	E	G	V	L	R	E	L	G	E	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V	A	G	L	K
Template Known Secondary structure				S	S	S	S								S				S	T	T	S	.	.	.	.	.	.	.	.	.														T	T	S	S	S							S	S					S			T	T	T			T	T	T	T					T	T	T	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240										.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I	K	T	A	I	S	L	G	I	A
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		K	L	T	T	K	P	.	V	V	G	V	G	R	F	T	S	P	D	A	M	V	R	Q	I	K	A	G	I	L
Template Known Secondary structure		G	G		S	S		.					S														T	T	S
Template Predicted Secondary structure								.
Template SS confidence
		291	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions