Job Description P77704 Confidence 87.58% Date Thu Jan 5 12:31:54 GMT 2012 Rank 223 Aligned Residues 168 % Identity 16% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100
Predicted Secondary structure																																				.	.	.																																				.	.
Query SS confidence																																				.	.	.																																				.	.
Query Sequence		N	A	E	M	L	M	G	V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	G	T	G	F	V	G	N	T	S	F	E	.	.	.	D	F	S	H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	.	.	H	G	M	N	S	L
Query Conservation																																				.	.	.																																				.	.
Alig confidence																			.																	.	.	.																							.	.	.											.	.			.
Template Conservation																			.																																										.	.	.															.
Template Sequence		K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	.	L	V	I	D	V	N	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	I	D	S	S	.	.	.	K	W	E	V	I	E	A	G	L	K	C	L	Q	G	.	K	S	I
Template Known Secondary structure																T	T		.	S									T	T	S															T						T	S							S	.	.	.													S	S	.
Template Predicted Secondary structure																			.																																										.	.	.															.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.				.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.								.	.	170	.	.
Predicted Secondary structure																																																															.							.	.	.	.	.	.	.
Query SS confidence																																																															.							.	.	.	.	.	.	.
Query Sequence		M	R	D	A	S	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	.	V	E	R	T	G	C	.	.	.	.	.	.	.	D	S	L	A	V
Query Conservation																																																															.							.	.	.	.	.	.	.
Alig confidence																.	.	.																.	.	.	.																										.							.	.	.	.	.	.	.
Template Conservation																.	.	.																.	.	.	.
Template Sequence		V	N	S	I	S	L	K	E	G	E	E	V	F	L	.	.	.	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	.	.	.	.	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L
Template Known Secondary structure							S	T	T							.	.	.										T						.	.	.	.		S			T	T					S																			T				G	G	G
Template Predicted Secondary structure																.	.	.																.	.	.	.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.				.	.	.	.	.	470	.	.	.	.	.	.	.	.	.					480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	.	S	V	P	L	V	L
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		A	V	A	T	G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G
Template Known Secondary structure				S	S	S		G	G	G	T	T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions