Job Description P77704 Confidence 96.66% Date Thu Jan 5 12:31:54 GMT 2012 Rank 77 Aligned Residues 181 % Identity 17% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	N	A	E	M	L	M	G	V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	G	T	G	F	V	G	N	T	S	F	E	D	F	S	H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A
Query Conservation
Alig confidence																															.	.	.	.	.																											.
Template Conservation																															.	.	.	.	.																											.
Template Sequence		F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	.	.	.	.	.	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	.	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I
Template Known Secondary structure																		T		S							G	G	G		.	.	.	.	.												T	S			S	S								S		.										T	T		S
Template Predicted Secondary structure																															.	.	.	.	.																											.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		105	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.			.	170	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																																																								.	.	.						.	.
Query SS confidence						.	.	.	.	.	.	.	.																																																								.	.	.						.	.
Query Sequence		S	A	F	D	.	.	.	.	.	.	.	.	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	.	.	.	R	T	G	C	D	.	.	S	L	A
Query Conservation						.	.	.	.	.	.	.	.																																																								.	.	.						.	.
Alig confidence						.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.						.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A
Template Known Secondary structure			G	G	G																										T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	G	G	G	S																		S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.														.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	.	.	A	S	G	I	S	D	A	D	I	K	T	A	I	S	L	G	I	A	K	I	N	I	H
Query Conservation																																						.	.
Alig confidence							.	.	.	.	.	.																										.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		D	T	V	G	C	.	.	.	.	.	.	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I	D	T	S
Template Known Secondary structure			S	S	S		.	.	.	.	.	.																		S	S							B		T	T	S													T							B
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions