Job Description P77704 Confidence 75.92% Date Thu Jan 5 12:31:54 GMT 2012 Rank 285 Aligned Residues 216 % Identity 23% Template c3eegB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii Resolution 2.78 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		W	N	A	E	M	L	M	G	V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	G	T	G	F	V	G	N	T	S	F	E	D	F	S	H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	.	.	.	.	H	G	M	N	S	L
Query Conservation																																																																								.	.	.	.
Alig confidence																															.	.	.	.	.																										.											.	.	.	.
Template Conservation																															.	.	.	.	.																										.
Template Sequence		L	N	T	E	E	K	I	I	V	A	K	A	L	D	E	L	G	V	D	V	I	E	A	G	F	P	V	S	S	.	.	.	.	.	P	G	D	F	N	S	V	V	E	I	T	K	A	V	T	R	P	T	I	C	A	L	T	R	A	.	K	E	A	D	I	N	I	A	G	E	A	L	R	F	A	K	R	S	R	I
Template Known Secondary structure																T	T	T		S							T	T	T		.	.	.	.	.												T	T			S	S								S	.													T	T		S	S
Template Predicted Secondary structure																															.	.	.	.	.																										.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Query Sequence		M	R	D	A	S	A	F	D	F	.	.	.	.	.	.	.	.	.	.	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	.	.	.	R	T	G	C
Query Conservation											.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	T	G	I	G	S	S	D	I	H	I	E	H	K	L	R	S	T	R	E	N	I	L	E	X	A	V	A	A	V	K	Q	A	K	K	V	V	H	E	V	E	F	F	C	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	A	G	R	A	D	Q	A	F	L	A	R	X	V	E	A	V	I	E	A	G	A
Template Known Secondary structure								S							T	S	T	T			T	T	T	T														S	S							.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	T	S														T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140														.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.													.	.
Predicted Secondary structure																																			.	.	.	.										.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.										.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	.	.	.	.	V	P	L	V	L	H	G	A	S	.	.	G	I	S	D	A	D	I	K	T	A	I	S	L	G	I	A	K	I	.	.	.	.	.	.	.	.	.	.	.	.	N	I
Query Conservation																																			.	.	.	.										.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.									.	.																				.	.	.	.										.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.									.	.
Template Sequence		D	V	.	.	V	N	I	P	D	T	T	G	.	.	Y	X	L	P	W	Q	Y	G	E	R	I	K	Y	L	X	D	N	V	S	N	I	D	K	A	I	L	S	A	H	C	H	N	D	L	G	L	A	T	A	N	S	L	A	A	L	Q	N	G	A	R	Q	V	E	C	T	I	N	G	I	G	E	R	A	G	N	T
Template Known Secondary structure		S		.	.						S	S	S	.	.																			T	T	G	G	G	S							B		S	S	S											T	T	T							B	G	G	G			S	T	T		B
Template Predicted Secondary structure				.	.									.	.
Template SS confidence
		164	.			.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		H	T	E	L	C	Q	A	A	M	V	A	V	K	E	N	Q	D	Q	P	.	.	.	F	L	H	L	E	R	E	V	R	K	A	V	K	E	R
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		A	L	E	E	V	V	X	A	X	E	C	H	K	E	T	L	G	L	E	T	G	I	N	H	K	K	L	V	P	I	S	H	L	V	S	T	L
Template Known Secondary structure		B										T	T									S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions