Return to main results Retrieve Phyre Job Id

Job DescriptionP77704
Confidence94.78%DateThu Jan 5 12:31:54 GMT 2012
Rank139Aligned Residues124
% Identity15%Templatec3eb2A_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100...... ...110.........120.........130.........140.........150....
Predicted Secondary structure 












.....






















Query SS confidence 


























. . . . .















































Query Sequence  WDHGRSMEIIHNAWTHGMNSLMRDASA. . . . . FDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTD
Query Conservation 


    
 
  

  









 .....
  



  
 


  

  

 

 


 


 
           
 
Alig confidence 


























.....


















.









................

Template Conservation 

       
  
   

 

 
 
 


   

 


  
          .   

 

  ................ 
Template Sequence  VRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQR. RVPVVAGVAS. . . . . . . . . . . . . . . . TS
Template Known Secondary structure  B
TT
S
BBTTSGGGTGGG

TT.SS
B................SS
Template Predicted Secondary structure 
















.




................

Template SS confidence 















































































   22.......30.........40.........50.........60.........70.. .......80.. ..
 
   155....160.. .......170.........180.........190.........200...... ...210.........220...
Predicted Secondary structure  ...




















.....







Query SS confidence 







. . .











































. . . . .
















Query Sequence  PDQAAEFV. . . ERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLH. . . . . GASGISDADIKTAISLG
Query Conservation 



  

...  



 






 

 
   
 

   
  
   
 





.....



        

  
Alig confidence 







...














...

























.....
















Template Conservation 
   
  
  
   


 
 
  
  ...       
      

     

 


 
  

   
   
  
   
Template Sequence  VADAVAQAKLYEKLGADGILAILEAY. . . FPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHP
Template Known Secondary structure  T
S

S...S



SS

TTT
SS


TST
Template Predicted Secondary structure 








...




















Template SS confidence 












































































   85....90.........100.........110 .........120.........130.........140.........150........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions