Return to main results Retrieve Phyre Job Id

Job DescriptionP77704
Confidence62.14%DateThu Jan 5 12:31:54 GMT 2012
Rank343Aligned Residues116
% Identity18%Templatec3e2vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:3'-5'-exonuclease; PDBTitle: crystal structure of an uncharacterized amidohydrolase from2 saccharomyces cerevisiae
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........
Predicted Secondary structure 







............................................
Query SS confidence 



































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  DIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation    
 

  
    


 



 
 
   


 


 ............................................
Alig confidence 



































............................................
Template Conservation 

  

 

   

  

  
           

          
   




                           
Template Sequence  DYVKLLERAAQRHVKNALVTGSSIAESQSAIELVSSVKDLSPLKLYHTIGVHPCCVNEFAEAYNESLYAKVISNPSFAQG
Template Known Secondary structure 
TT


STTT
SS


GGGGGGG


T
Template Predicted Secondary structure 































Template SS confidence 















































































   63......70.........80.........90.........100.........110.........120.........130.........140..
 
   40.........50...... ...60......... 70.........80
Predicted Secondary structure  ..............






.........
...




.............
Query SS confidence  . . . . . . . . . . . . . .
















. . . . . . . . .












. . .










. . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . AKSPVIISFGTGFVGNT. . . . . . . . . SFEDFSHMMVSMA. . . QKATVPVITHW. . . . . . . . . . . . .
Query Conservation  ..............  





         .........            
...  
 


 


.............
Alig confidence  ..............
















.........












...










.............
Template Conservation   
  
  
           










        
 
   
  

 

    
   





 
 
    
 


 
Template Sequence  KLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQILER
Template Known Secondary structure 
STT
STT
TTTS
TTSSTS
S
Template Predicted Secondary structure 



















Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   81... .....90........ .100.........110.........
Predicted Secondary structure  .................................



..




.




Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



. .













.




















Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DHGR. . SMEIIHNAWTHGMN. SLMRDASAFDFEENIRLTKEA
Query Conservation  .................................

  ..  
 
  

  


.






 
  



  
 

Alig confidence  .................................



..













.




















Template Conservation                                  
 
 


  
 
   
 

    

              

 
Template Sequence  FVVGFTDEKDTFQLQKLSSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLNLSPNIFIGVNGCSLRTEENLAVVKQI
Template Known Secondary structure 

SS
TT
GGG


TT



TT


S




TT
GGGGSSTS
Template Predicted Secondary structure 









































Template SS confidence 










































































   241........250.........260.........270.........280.........290.........300.........310.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions