Job Description P77704 Confidence 89.26% Date Thu Jan 5 12:31:54 GMT 2012 Rank 210 Aligned Residues 115 % Identity 19% Template c3dfyJ_ PDB info PDB header:isomerase Chain: J: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	R	.
Query Conservation																																																																																	.
Alig confidence																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.											.
Template Conservation																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		V	K	E	A	K	K	I	F	E	E	G	F	R	V	I	K	I	K	V	G	E	.	N	L	K	E	D	I	E	A	V	E	E	I	A	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	G	A	K	Y	I	V	D	A	N	M	G	Y	T	.	Q	K	E	A	V	E	F	A	R	A	V
Template Known Secondary structure											T	T										S	.															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T								T	T		S		.
Template Predicted Secondary structure																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.
				165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I	K	T	A	I	S	L	G	I	A	K	I
Query Conservation		.	.
Alig confidence		.	.											.	.	.	.	.	.	.						.																			.
Template Conservation														.	.	.	.	.	.	.						.																			.
Template Sequence		Y	Q	K	G	I	D	I	A	V	Y	E	Q	.	.	.	.	.	.	.	P	V	R	R	E	.	D	I	E	G	L	K	F	V	R	F	H	S	P	F	P	V	A	A	.	D	E	S	A	R	T	K	F	D	V	M	R	L	V	K	E	E	A	V	D	Y
Template Known Secondary structure				T	T				S					.	.	.	.	.	.	.		S		T	T	.													S	S					.	S	T	T		S	S										T	T			S
Template Predicted Secondary structure														.	.	.	.	.	.	.						.																			.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.								.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions